Query= MSMg01no088_c20.b1 MSMg01no088_c20.b1 CHROMAT_FILE:
MSMg01no088_c20.b1 PHD_FILE: MSMg01no088_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:33 2005
(506 letters)
>mm_chr7_120091178_120092082
Length = 905
Score = 897 bits (464), Expect = 0.0
Identities = 479/484 (98%), Gaps = 1/484 (0%)
Strand = Plus / Plus
Query: 23 attttgcatggggccaactcatgttgggagattcattgttgcctagacaaataaatctcc 82
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 223 attttgcatggggccaacgcatgttgg-agattcattgttgcctagacaaataaatctcc 281
Query: 83 cagatttgattgctgcaaaccttcagagctaggggcgacttcttgtctgtggagtcatcc 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cagatttgattgctgcaaaccttcagagctaggggcgacttcttgtctgtggagtcatcc 341
Query: 143 cttagcgactggctctttattcccatgctctctattaatttgctgcaagcacaccaattg 202
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cttagtgactggttctttattcccatgctctctattaatttgctgcaagcacaccaattg 401
Query: 203 ccattctgcacctctgggtgctggtctttatttagtgcttgttaggagccttttactttg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ccattctgcacctctgggtgctggtctttatttagtgcttgttaggagccttttactttg 461
Query: 263 ggaccctagcccgtgggatgatggcgcccatatccggtggggtcttttcccctcagttcc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggaccctagcccgtgggatgatggcgcccatatccggtggggtcttttcccctcagttcc 521
Query: 323 ttactggcagcaccctcacagatatgcaagaggtacgtcatttaggcgattccaaatcca 382
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 522 ttactggcagcaccctcacagatatgcaagaggtacgtcatttaggtgattccaaatcca 581
Query: 383 gtgaggttaataatgattaccttggacataagtattttatatactgtatattgctttatt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gtgaggttaataatgattaccttggacataagtattttatatactgtatattgctttatt 641
Query: 443 ccacacaatgccaactctatcatgttcttctcatcctttacccagaagctagaggcttac 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ccacacaatgccaactctatcatgttcttctcatcctttacccagaagctagaggcttac 701
Query: 503 aaag 506
||||
Sbjct: 702 aaag 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 905
Length adjustment: 10
Effective length of query: 496
Effective length of database: 895
Effective search space: 443920
Effective search space used: 443920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_c20.g1 MSMg01no088_c20.g1 CHROMAT_FILE:
MSMg01no088_c20.g1 PHD_FILE: MSMg01no088_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:34 2005
(136 letters)
>mm_chr7_120241936_120242471
Length = 536
Score = 255 bits (132), Expect = 6e-73
Identities = 135/136 (99%)
Strand = Plus / Minus
Query: 1 taaatagacttttttcctttaaaaaggtactagatgtgttgctatgcccctaccacatga 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 336 taaatagacttttttcctttaaaaaggtactagatgtgttgctatgtccctaccacatga 277
Query: 61 tataattcatgttttaaactataccaactggatttgtggctataggctaaaatttaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tataattcatgttttaaactataccaactggatttgtggctataggctaaaatttaacct 217
Query: 121 tagtttcatttgaaga 136
||||||||||||||||
Sbjct: 216 tagtttcatttgaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 536
Length adjustment: 8
Effective length of query: 128
Effective length of database: 528
Effective search space: 67584
Effective search space used: 67584
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
