Query= MSMg01no089_p20.b1 MSMg01no089_p20.b1 CHROMAT_FILE:
MSMg01no089_p20.b1 PHD_FILE: MSMg01no089_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:00 2005
(462 letters)
>mm_chr7_103539411_103540272
Length = 862
Score = 799 bits (413), Expect = 0.0
Identities = 431/437 (98%)
Strand = Plus / Minus
Query: 25 gatatccttggatttctcattcttctccctctgtctccagagtactgggataacaactat 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatatccttggatttctcattcttctccctctgtctccagagtactgggataacaactat 542
Query: 85 ggaccataccatttagcttatgaggtgccaggaattcaactgaggacttcctgctgacaa 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaccataccatttagcttatgaggtgccaggaattcaactgaggacttcctgctgacaa 482
Query: 145 ggcaagcttcgttctgcctccactacaaccccgatttgtcctgaccatctgcctagcaca 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcaagcttcgttctgcctccactacaaccccgatttgtcctgaccatctgcctagcaca 422
Query: 205 atagacttgttggaaaaggaggatggaaggctaggatacctatctcactcattttctatc 264
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 atagacttgttggaaaaggaggatggaaggctaggatacctatctcactcactttctatc 362
Query: 265 cttctgcctactgtctgtctgtctgtctgtctgtctgaagcctgctgcaaggaggcaggt 324
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctctgcctactgtctgtctgtctgtctgtctgtctgaagcctgctgcaaggaggcaggt 302
Query: 325 gattgacaaaagcctcctggatgcttttgtcttgggctggtgcaagacagcgaaagctgt 384
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 gattgacaaaagcctcctggatgcttttgtcttgggctggtgcaagacagtgaaagctgt 242
Query: 385 taatgccatctccctcactggagctttgtcctaaccttgtgatttctgactcattgtgaa 444
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 241 taatgccatctccctcactggagctttggcctaaccttgtgatttctgactcattgtgaa 182
Query: 445 aacaggttctttgatga 461
|||||| |||||||||
Sbjct: 181 aacagggcctttgatga 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_p20.g1 MSMg01no089_p20.g1 CHROMAT_FILE:
MSMg01no089_p20.g1 PHD_FILE: MSMg01no089_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:00 2005
(388 letters)
>mm_chr7_103412537_103413325
Length = 789
Score = 729 bits (377), Expect = 0.0
Identities = 386/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Plus
Query: 1 aagaagcatcagggtgacttacggttcatagaagaaaccctgactaggaggatttgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaagcatcagggtgacttacggttcatagaagaaaccctgactaggaggatttgaact 260
Query: 61 caggctcctgaaagctcatgcctgtgcacatcatattttgagttcaattgtcccggtcct 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 caggctcctgaaagctcatgcctgtgcacatcatatttggagttcaattgtcccggtcct 320
Query: 121 acgcagtgtagtcaggagtcccatggattcctgagtccccatctcaagtgtatggctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgcagtgtagtcaggagtcccatggattcctgagtccccatctcaagtgtatggctgat 380
Query: 181 agggttctaccagataaatcagtaggatgagaaaatgttatctttattctggtagagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggttctaccagataaatcagtaggatgagaaaatgttatctttattctggtagagaag 440
Query: 241 gttttcttggtc-cacagcacatactgaagactcagtattctgcaagctccaaggtgggt 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttttcttggtcgcacagcacatactgaagactcagtattctgcaagctccaaggtgggt 500
Query: 300 atgcagctcaggctccaaggcggttatgcagctcatgatctcaagatgcttctcctctta 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcagctcaggctccaaggcgggtatgcagctcatgatctcaagatgcttctcctctta 560
Query: 360 tctaatctaattccctcccctcccctccc 388
|||||||||||||||||||||||||||||
Sbjct: 561 tctaatctaattccctcccctcccctccc 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 789
Length adjustment: 9
Effective length of query: 379
Effective length of database: 780
Effective search space: 295620
Effective search space used: 295620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
