Query= MSMg01no093_b20.b1 MSMg01no093_b20.b1 CHROMAT_FILE:
MSMg01no093_b20.b1 PHD_FILE: MSMg01no093_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:19 2005
(131 letters)
>mm_chr7_78785917_78786447
Length = 531
Score = 223 bits (115), Expect = 5e-63
Identities = 127/131 (96%)
Strand = Plus / Minus
Query: 1 attatttaccccgcgtttgctaaaatctcagttctaatccactagcttcctccttccttt 60
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 attatttaccttgtgtttgctaaaatctcagttctaatccactagcttcctccttccttt 272
Query: 61 ctcccacctctgattttttttcttgcaaatgtattactcagtaatttcctgagaactttt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 271 ctcccacctctgattttttttcttgcaaatgtagtactcagtaatttcctgagaactttt 212
Query: 121 atttcaccaag 131
|||||||||||
Sbjct: 211 atttcaccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 531
Length adjustment: 8
Effective length of query: 123
Effective length of database: 523
Effective search space: 64329
Effective search space used: 64329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_b20.g1 MSMg01no093_b20.g1 CHROMAT_FILE:
MSMg01no093_b20.g1 PHD_FILE: MSMg01no093_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:19 2005
(278 letters)
>mm_chr7_78663409_78664085
Length = 677
Score = 468 bits (242), Expect = e-136
Identities = 269/278 (96%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 1 tttctagcacagaatcaaggaaattattacagccagtgaactgggcagtgatggtatcca 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 201 tttctaggacagaatcaaggaaattattacagccagtgaactgggcagtgatgttgtcca 260
Query: 61 gacatcactaatttttaatttgtaattgatctattattgctattgttcattatttaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 gacatcactaatttttaatttgtaattgatctattattgctattgttcattatctaaaca 320
Query: 121 tgtctcttgattacattgttttgtgaaaattctataaataaacataatgaattcccatta 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tgtctcttgattacattgttttgtgaaaattctataaacaaacataatgaattcccatta 380
Query: 181 ctccactccactttcttttatgtccccttttacactatacattccctctcctctctacag 240
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 cttcactccactttcttttatgtccccttttaaactatacattccctctcctctctacag 440
Query: 241 cgtcctactttcacatttatatcttttatttttgttct 278
|||||| ||||||||||||||||||||||||||||||
Sbjct: 441 -gtcctaatttcacatttatatcttttatttttgttct 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 677
Length adjustment: 9
Effective length of query: 269
Effective length of database: 668
Effective search space: 179692
Effective search space used: 179692
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
