BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-093M20.T7 (MSMg01no093_m20.b1) | MSMg01-093M20.TJ (MSMg01no093_m20.g1) |
ACC | AG311145 | AG311146 |
length | 1,307 | 1,215 |
length of high quality (start - end) | --- | 354 (79 - 432) |
definition | CHROMAT_FILE: MSMg01no093_m20.b1 PHD_FILE: MSMg01no093_m20.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:48:57 2005 | CHROMAT_FILE: MSMg01no093_m20.g1 PHD_FILE: MSMg01no093_m20.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:48:57 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | TATTGGGCGCTAXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGGT
ATCATTCCCACCCTTAAGAAGCTGTTTAGGNCAAAGATGAAAGGACACAC
CCCCCTTAAGAGGACAAGCCGCCCTCATAGGCAGTCTTCCCACCCGTGTT
CCACGAATCTCTTTTCCCTGTCTATACCCCGCCATTTCATCTGCCGAAGC
TCCCAGGATAGCCTTTACCATCTCATAGTTTCAGCCCTTGAATAAACCCT
GACTTCCTTCTCACCACGACCTTGTCTCACAGTATTGGCTTCTGATAGCT
GAACTCGCTCATTCTTGTATTTTAATCATCTCAATCATCAGACTTGCTGG
TGTCCGCCTGCTATCCCAGTATCTCGGAAGCGGAAGATTACTTTTTTTTA
CCAGCTGTTTTCATGGCTAGTTCCTCTGTTTAATATTATTCCCTCTTTTC
TTTTTTCCCCCCCCTCGTTTGTATTTTCACTATTAATCAAAGATGCTATT
TTTTGTATTTGTCTCTTCTTTTTGCTTCTTCTGTTTATTTCTTTTCTTTT
CATCTTTGTCTATTATATTCTTTTTCTTCTTCTTTCTTTTTTACCTTCCT
CTCTTTTCTTCTCTTTTCTATTTCTTCTATTCTTACTTCTTTCTTATTAC
TTACTTTTCTCTCTTTTTCTTTTTTTTTTTCTTCTTTTTTTCTTTATTCT
TCTTCTTTTTTATTTCTTTCTTTCTTTTTCATTTTTTTTTTTCTTTCTTA
TTTCTTTTCTTTTTTCTCTCCTTTTTATTATTCTATTCTTCTATCCTTTA
TTCTTTTCATTTTTCTTACTTTTTATTTTTTTTATCTTTTATCTTTATCT
TCCTTCTTCCCTATTTTTTTTTTTCTTTTTTTTTTTTTTTTATTCTTTCT
TTTTCTTTTACTACTTCTTTTATTTTTTTTTTTTTCCTTATCTCCTTTAC
TTTTCCTTTTTTTTTTTCTTCATTTTTTATCTTTTTTTTTTTTCTTTTCT
TCTCTTTTATATATTCCTTTTCTTATTTTCACTTTCTTCTTTCTTTTCTT
TTCTTCCTTCTTTTTTTTACTTTTTTCTTTTTGTTCTTTTATTTTTATAT
TTTTACTTATTTTTGTTTTTTCTATCTATCTTTGTTTCTATTTTTCTCCT
CCTCTTTTCTTTTTATCTTTTTATCTTTTATATTTTTTCTTTTCTTCCTT
AATATCTTTTTTTTCTTTCTTTTATTTTTTCTTTATCTTTATTTCTNTCC
TCTCTTTTCTTTTTTCTCTCTCCTTTATTCCCATTTCCTTTCTATTTATT
CATTTAT
| CCATTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCCCCTTAATTTGAAGATCATACAGCTATCATGGAACAGTTT
CCCTCTAGAGACTCATTGACTTTCTCTCTTCTGTCCTTTCCAGTGCTAGG
AGTGACTAGATTGTAATTAGTACTGTACATCATGAATAAGCTGGTAATCC
TGCCTCGGGCCATGTGGATAGTACAGCCTGAAATAGGTCAGAAAACAGTA
GCTAAAGAACCTTATCTCTTCTGATAGGATTTGAATGACTCTAGAAAGCC
ATCATCTCCCAAAATATTCCTCCCTACCTAGCATATTATCTGACCTTATA
TCTTTATACCTTTATTTCTTGAGAATATAAGCTTCATGTTTTTAATTTTA
AAATGTCACATGTTTTATTTATGTAATCATGCACTAAGAACCCCTTCATG
TGCCACTATATTAGGTACATGCTAGGACTGTGTAGTAATAATCCCACTGA
CCCGTTTCTCCGAAACCTTGTGCAATGAAGCATAATGACCATAGGTCTAA
ACAAAGTATAATCTGACTCTCTGTCTCTTCCTTTATCGCTATATAAGCAT
TCATATTGGTATTCGTGTTAATGCATTATCTGCTTAGTACTCTGAATTCT
TTCTTTTGCCCTCGCTATAATAAGATAATCTCATCCTTTCTCTTCGTTTA
TTATATTGTTAATACATTCCTTTATTTATTCCTCATCTTCTATTTATTCT
CCTATGTTCAACGTCTTGATGTAGTCTTCATTTGTTTTTGTTCTATGTTG
CGTAATTCCTGTTTTTATTTTTTCTTTTCTTTTTTATTTTTGTTTTTTTT
TTTCTAATTTTCATTCTTTATTATTATTTTTTTTTGTTTTTTTTTTTCTT
TTTCTCTTATATCTTTTTACTTTTTCCTTTTTTTTTTTTCCCTTTTTTTT
TTATTACTATCTCTTCTTTTTTTTTATTTTTTTCTTTCTTCCATATCTTT
TTCTTTTCTTCTATTTTATCTTTTTTTTTTGTATTTTACTATCATTTTCT
TATTATTCACTCACTTTCATCTTCTTTTTTTCCAATTCTGTATTTTTCAT
ATTTTTTTTTTTCTACTTTTTCCTCCTTTTCCATTCTTTTTCTTCTTAAT
TATCTTACATTTCTCATATTCTTACCTCTCCGTAATTTATTTCTACACCT
TTCTATCTTTGTCTC
|
quality values | Open.Hide. 8 8 10 8 10 10 11 15 16 10 9 9 13 10 13 13 13 11 10 10 15 15 22 22 24 22 22 22 29 29 34 42 40 40 39 39 31 34 25 25 28 36 39 39 53 36 35 28 28 22
28 20 33 33 30 30 23 23 11 11 8 8 8 8 8 8 10 12 11 16 16 16 19 15 18 23 30 21 21 3 0 3 23 23 37 37 37 34 37 28 28 28 34 28 18 14 14 15 24 10
10 9 8 8 8 10 10 10 11 11 11 14 11 10 8 8 8 18 13 15 11 11 11 17 19 14 10 10 12 15 10 8 8 11 10 14 15 23 18 23 20 28 31 29 33 18 17 8 8 8
13 12 16 25 33 39 39 35 32 32 43 43 57 57 59 48 39 37 37 30 25 22 15 15 10 11 12 11 9 9 11 18 15 28 22 30 24 17 15 24 30 36 30 30 35 37 31 24 19 19
23 29 24 25 17 17 17 15 25 18 11 11 11 19 21 31 25 25 25 30 30 32 25 30 24 15 15 16 19 26 19 14 14 14 14 17 22 32 30 30 18 16 15 18 12 14 18 24 33 39
35 35 32 32 30 30 26 32 24 24 18 14 14 14 21 22 25 25 28 28 30 30 37 31 30 27 17 17 20 16 13 10 15 15 23 23 17 17 17 19 24 30 21 14 10 8 8 8 12 16
18 14 13 12 13 12 13 13 14 15 13 13 16 23 16 10 11 11 8 8 9 11 11 11 11 8 8 6 7 8 8 8 8 8 8 8 8 11 12 11 11 9 9 8 8 8 8 10 10 11
9 12 9 10 10 9 11 11 20 15 15 11 11 11 11 11 9 8 8 8 8 8 12 16 19 12 21 15 11 11 11 10 9 9 9 9 9 9 11 12 12 10 16 14 19 19 15 19 11 11
12 16 12 13 14 26 18 21 10 10 10 10 12 8 8 8 6 6 8 8 8 8 8 8 8 13 13 9 7 8 8 8 8 8 6 6 8 8 8 8 9 11 11 11 10 10 9 9 12 24
22 14 18 12 10 10 10 14 16 20 27 15 10 6 6 6 8 8 11 11 11 10 10 10 10 10 11 11 10 11 11 12 12 16 11 8 8 6 6 11 6 8 8 8 9 8 8 8 8 8
8 10 8 8 6 6 8 8 10 10 8 8 6 6 11 11 7 7 8 8 8 8 8 8 8 8 6 6 8 8 10 10 11 8 6 10 10 10 12 11 13 13 14 12 12 8 8 8 12 9
9 8 8 6 6 10 8 6 6 10 6 6 8 9 12 11 12 10 10 10 12 15 14 22 22 22 24 17 15 13 10 9 8 8 8 8 8 8 8 8 8 6 6 8 7 6 8 6 8 8
8 9 13 10 10 10 6 6 8 8 8 8 9 6 12 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 11 10 10 10 10 12 11 16 9 9 9 9 12 10 13 10 10 9 8
11 8 11 10 9 8 8 10 10 9 9 10 11 8 8 8 10 10 15 9 11 11 14 12 11 9 8 8 10 8 8 8 8 8 7 10 10 12 12 10 11 11 8 10 6 7 8 7 7 8
8 6 8 8 8 8 8 11 12 13 9 9 10 10 10 10 10 9 9 14 9 9 9 10 11 11 11 12 16 9 9 9 10 10 14 17 24 17 15 15 15 14 14 10 10 8 8 10 7 6
8 6 9 11 11 12 10 10 8 10 8 8 10 10 10 10 8 6 6 8 6 7 10 8 8 8 10 10 8 8 8 8 8 6 6 8 8 8 8 8 10 8 8 10 10 10 10 17 14 12
9 9 9 9 8 8 10 8 8 8 8 8 10 11 7 7 8 6 6 8 12 10 10 8 9 9 9 10 10 10 10 8 6 6 8 8 10 8 8 6 6 8 8 8 10 8 6 6 10 10
8 8 8 8 8 8 7 9 8 7 6 6 8 8 13 11 22 20 14 12 12 10 11 8 9 9 9 10 10 10 8 8 8 10 13 13 10 8 6 8 8 8 8 10 6 7 8 11 8 9
10 10 8 12 7 9 8 10 8 8 8 6 6 6 8 8 13 8 8 8 8 8 8 8 12 16 16 23 19 23 12 10 9 8 8 8 9 8 8 6 6 8 8 9 9 9 9 7 6 8
8 10 8 9 10 12 9 13 9 9 9 10 10 10 10 12 8 10 8 8 8 8 8 8 10 8 8 6 6 6 6 6 8 8 10 10 10 10 10 12 10 11 6 6 6 6 8 9 8 8
10 8 10 9 9 9 9 8 8 8 8 8 8 8 9 9 11 12 8 8 8 8 8 8 10 10 11 10 12 6 6 8 8 9 9 8 10 6 9 8 12 8 6 6 10 10 8 9 9 10
12 9 9 8 8 10 6 6 8 8 12 15 19 19 17 10 8 8 8 6 7 11 12 13 10 8 8 8 8 8 13 9 7 8 8 8 8 8 8 8 6 6 10 6 8 8 8 8 8 8
11 18 13 8 8 8 7 8 6 6 8 8 9 9 9 9 9 9 8 15 10 8 8 8 8 8 6 8 8 8 9 9 9 9 9 8 10 8 6 6 8 8 8 8 8 8 8 8 8 8
8 8 8 12 8 8 8 8 10 10 13 10 10 10 10 12 9 7 13 8 8 6 6 8 8 10 15 15 8 8 6 8 8 10 14 15 8 8 7 7 11 12 12 9 9 9 9 8 8 8
8 8 6 7 6 9 6 8 8 11 10 15 11 13 11 12 11 10 10 10 8 8 6 6 8 10 14 6 8 6 6 8 8 8 8 8 8 8 8 6 6 8 8 13 16 3 0 3 10 10
8 8 8 8 8 8 8 8 8 8 8 8 14 10 8 8 8 13 10 10 6 6 8 10 11 8 8 8 10 8 8 7 7 8 8 8 10 7 7 10 8 8 8 8 8 8 6 6 6 6
6 8 8 13 11 9 9 | Open.Hide. 8 8 6 6 6 6 6 8 3 0 3 6 6 6 6 10 9 10 8 10 10 9 3 0 3 12 12 19 9 9 13 19 21 26 14 14 14 32 32 33 33 28 33 39 34 32 30 30 30 39
37 43 47 47 47 34 34 16 16 12 12 13 8 10 8 8 8 8 12 18 23 23 20 18 19 10 10 10 17 21 32 42 36 37 37 42 37 47 40 42 32 32 32 43 43 42 32 32 18 20
11 22 12 11 11 16 12 12 12 22 22 39 39 32 35 39 43 46 47 47 48 48 50 50 41 41 41 50 50 50 50 46 46 46 46 46 50 57 57 57 42 36 24 24 22 24 30 42 42 50
54 57 48 48 50 50 50 50 37 37 57 57 57 57 37 37 36 50 35 35 24 26 24 24 17 17 24 38 43 52 52 52 52 57 52 54 43 43 32 32 33 43 28 35 35 35 36 45 57 57
57 52 52 52 43 43 43 39 39 39 38 38 39 33 33 28 28 35 44 38 38 20 20 35 38 35 35 35 47 47 43 39 39 34 32 15 15 22 26 14 16 20 26 26 31 43 43 43 43 20
17 17 23 34 35 35 43 43 43 52 52 62 62 62 62 62 52 52 52 62 62 62 62 62 62 43 43 35 39 43 62 62 62 62 43 43 35 43 43 43 38 43 43 43 43 43 35 35 35 43
43 41 43 43 43 44 43 35 32 36 26 31 31 43 44 44 44 35 35 31 35 39 43 43 47 43 43 35 35 20 35 43 43 62 44 44 35 35 35 44 36 23 12 12 12 27 43 52 52 57
57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 52 43 38 36 17 15 14 24 36 39 24 19 8 8 8 10 19 19 43 42 31 19 13 12 12 10 10 11 12 27 32 38 27
27 29 27 38 28 24 24 12 12 13 32 38 52 52 52 50 57 57 57 57 43 42 33 32 32 32 24 24 10 10 10 10 10 13 17 16 11 11 12 12 12 13 11 14 13 15 21 19 18 13
12 10 10 10 10 23 29 29 32 40 32 32 23 14 14 21 30 28 28 28 31 22 20 11 11 11 12 16 16 19 19 16 16 11 10 10 11 13 12 14 13 26 12 12 11 11 11 11 18 13
13 11 11 11 11 12 30 29 18 16 10 10 10 11 13 19 11 11 11 11 12 12 11 11 11 11 13 13 11 11 11 11 13 11 11 12 18 12 13 13 12 12 12 10 10 10 10 10 22 12
12 11 12 12 11 10 10 10 10 9 9 11 11 12 18 12 10 10 13 10 9 13 8 8 7 6 8 8 10 10 10 10 10 9 9 10 10 10 11 10 8 8 8 8 10 10 11 11 11 11
16 11 8 8 6 6 8 8 8 8 8 8 8 8 9 9 12 12 8 8 8 8 8 8 11 12 11 12 11 16 16 18 14 12 19 11 11 9 10 8 8 8 8 10 13 10 10 17 19 21
14 13 10 8 8 8 8 9 9 8 8 6 6 8 10 12 14 12 19 9 8 7 7 8 8 9 13 16 15 12 9 9 9 8 8 10 10 8 14 8 8 8 10 9 9 8 8 8 8 8
9 11 8 8 10 10 8 8 9 8 8 8 8 8 8 8 8 6 6 8 8 8 10 8 15 8 11 8 8 8 6 8 8 9 8 8 8 11 10 8 6 6 8 10 10 10 15 8 8 9
8 11 10 8 8 8 8 6 6 8 8 8 8 6 7 10 10 10 10 10 8 8 8 6 7 10 8 10 10 10 9 9 10 11 9 13 17 15 14 10 10 8 8 8 13 8 8 8 8 9
9 9 12 10 9 9 9 9 10 9 11 10 11 10 8 8 8 11 10 10 12 10 10 10 10 8 8 8 8 8 12 11 14 11 11 10 10 8 10 10 11 10 12 15 16 19 13 16 11 12
10 17 16 11 11 10 10 10 10 13 8 8 10 8 8 8 16 8 8 8 8 10 8 10 9 8 8 10 10 12 10 12 11 12 10 10 10 13 16 21 19 14 12 11 9 10 10 8 6 8
8 8 8 16 10 10 10 10 15 11 8 8 7 6 8 8 8 8 8 8 12 10 8 10 8 8 6 7 10 8 12 10 13 11 11 10 11 8 10 8 8 6 6 8 8 9 13 18 18 12
12 9 9 11 11 8 8 6 6 8 7 7 8 8 8 9 9 15 13 15 12 10 10 12 10 10 11 11 8 8 8 8 8 8 8 11 11 13 13 8 8 8 8 8 10 8 6 6 11 12
8 9 9 10 17 10 9 9 9 9 8 8 6 6 11 8 8 8 6 6 8 11 12 12 13 13 13 12 10 8 8 6 6 8 8 10 8 8 7 6 10 10 8 6 6 10 13 11 8 8
8 8 8 8 8 8 8 8 7 7 9 8 8 8 8 8 8 6 6 8 8 10 10 10 12 11 10 15 12 12 10 9 9 9 8 8 6 6 8 8 8 6 6 10 8 8 8 7 6 8
8 9 10 18 19 19 15 11 11 11 13 8 8 6 6 8 8 8 8 11 13 11 10 8 8 8 8 8 8 10 9 7 7 8 8 10 8 9 8 8 8 8 10 10 10 8 8 8 9 9
8 8 6 6 8 6 8 8 8 10 12 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 6 8 8 8 8 8 8 8 13 10 10 8 8 8 8 8 8 8
8 8 8 8 8 8 8 8 10 9 9 8 11 6 6 |