Query= MSMg01no095_e15.b1 MSMg01no095_e15.b1 CHROMAT_FILE:
MSMg01no095_e15.b1 PHD_FILE: MSMg01no095_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:15 2005
(290 letters)
>mm_chr7_96818264_96818950
Length = 687
Score = 509 bits (263), Expect = e-148
Identities = 280/287 (97%), Gaps = 3/287 (1%)
Strand = Plus / Plus
Query: 1 ccatacatcggaagggtccgagcaagtctgcgtatccatttcctgactttattgcttcaa 60
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 ccatacatcggaagggtcggagcaagtctgcatatccatttcctgactttattgcttcaa 260
Query: 61 ccagttcctaaactagaatgtagttcctggacagatgatggaggagcacagaaacatgaa 120
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ccagttcctaaactagaatgttgttcctggacagatgat---ggagcacagaaacatgaa 317
Query: 121 gagcttccaagaaagactgcacacaggccctgaacctagcatggtagcttcaatcctatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 318 gagcttccaagaaagactgcacacaggccctgaacctagcatggtagctttaatcctatt 377
Query: 181 ggtaccaaacacctgttgttctgatgtgtgtgttgtgtgttcagcacacacctgtgatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggtaccaaacacctgttgttctgatgtgtgtgttgtgtgttcagcacacacctgtgatcc 437
Query: 241 tgatggtagcacgcacctgtaattctaatgatagcacacatgtgtag 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgatggtagcacgcacctgtaattctaatgatagcacacatgtgtag 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 687
Length adjustment: 9
Effective length of query: 281
Effective length of database: 678
Effective search space: 190518
Effective search space used: 190518
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no095_e15.g1 MSMg01no095_e15.g1 CHROMAT_FILE:
MSMg01no095_e15.g1 PHD_FILE: MSMg01no095_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:15 2005
(285 letters)
>mm_chr7_96991093_96991776
Length = 684
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 ttttcaattgaaggagagactttttttttttctttcagaaaatgatttccccatataaat 60
||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 ttttcaatttaaggagagac-ttttttttttcttttagaaaatgatttccccatataaat 424
Query: 61 ccagggcataaaatgtttttaacctttgatcttatacttctacttttggaaatcaatgca 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 423 ccagggcataaaatgtttttaacctttgatcttatacttctacctttggaaatcaatgca 364
Query: 121 tgggaatctgaaatacgggctagaacatctgggacagttttatttgtaatacacagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgggaatctgaaatacgggctagaacatctgggacagttttatttgtaatacacagtgat 304
Query: 181 tggaaataatctaaacatcgaacaaatgaaagataattgagtaaattaggtagggtagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tggaaataatctaaacatcgaacaaatgaaagataattgagtaaattaggtagggtagac 244
Query: 241 actcaggagaatattttcaacgatgaaaaatgaccaccactgg 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 actcaggagaatattttcaacgatgaaaaatgaccaccactgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
