Query= MSMg01no096_m14.b1 MSMg01no096_m14.b1 CHROMAT_FILE:
MSMg01no096_m14.b1 PHD_FILE: MSMg01no096_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:16 2005
(506 letters)
>mm_chr7_133703821_133704728
Length = 908
Score = 768 bits (397), Expect = 0.0
Identities = 478/513 (93%), Gaps = 21/513 (4%)
Strand = Plus / Plus
Query: 5 gaattcttctcta--tttcctacttactttttgagggttggag-aatagaaaaaa-tcag 60
||||||||||||| ||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 205 gaattcttctctaatttt--tacttactttttgagggttggagaaatagaaaaaactcat 262
Query: 61 taacatgcttgttatgtaaataagatctgggtttgattcctaacacaaacaagcacagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taacatgcttgttatgtaaataagatctgggtttgattcctaacacaaacaagcacagac 322
Query: 121 actccccccacccccatacctgttacaactaatgggcaaaagataagaatttaaaagaga 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 323 actccccccacccccatacctgttacaattaatgggcaaaagataagaatttaaaagag- 381
Query: 181 acaagaatgatacctgagggtttggaaggaaacaa--aagggggaaataa-----tataa 233
|||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 382 --aagaatgatacctgagggtttggaagga---aaggaagggggaaataatatattataa 436
Query: 234 atccgtgtccctgccccatgcacaaaaaagcaaggtgtggtagcatctgcttgtaatctc 293
||| | |||||||||||||||||| |||||| ||| |||||||||||||||||||| ||
Sbjct: 437 atctgcgtccctgccccatgcacagaaaagccaggcgtggtagcatctgcttgtaa--tc 494
Query: 294 aggtctctgggacacaggatcctggagctcacagcccaggtagcctaaacactcagtaag 353
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 495 aggtctctgagacacaggatcctggagctcacagcccaggcagcctaaacactcagtaag 554
Query: 354 ctacaggagagtggaagaaccccgtcttaaaaaaataaggcaaggttaggcatggtacca 413
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 555 ctacaggagagtggaagaaccctgtcttaaaaaaataaggcaaggttaggcatggtacca 614
Query: 414 cacactgttagtcttcaatcacagcacttaggaggtagatacagatacatctctatgagt 473
||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 615 cacactgttagccttcaatcacagcacttaggaggcagatacagacagatctctatgagt 674
Query: 474 tccagggtaccttgacctgtacagtgagattct 506
|||||||||||||||||||||||||||||||||
Sbjct: 675 tccagggtaccttgacctgtacagtgagattct 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 908
Length adjustment: 10
Effective length of query: 496
Effective length of database: 898
Effective search space: 445408
Effective search space used: 445408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_m14.g1 MSMg01no096_m14.g1 CHROMAT_FILE:
MSMg01no096_m14.g1 PHD_FILE: MSMg01no096_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:16 2005
(247 letters)
>mm_chr7_133823819_133824465
Length = 647
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 tttctccagcacgctacccatttcagtatcttggatttggcagttgaagtgttacgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttctccagcacgctacccatttcagtatcttggatttggcagttgaagtgttacgctct 388
Query: 61 tttagagggaccatcagaccttgtttttcttcttctgatctgtgcacctgttggggtgga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tttagagggaccatcagaccttgtttttcttcttctgatctgtgcacctgttggggtggc 328
Query: 121 tatgattgactgtcatttgaggactcaatccccagtattcctcagggggtagaagcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tatgattgactgtcatttgaggactcaatccccagtattcctcagggggtagaagcagtt 268
Query: 181 caaccaaccaacagtagtataagtcaaaccaaatatagaaatgcactttagctgagtggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caaccaaccaacagtagtataagtcaaaccaaatatagaaatgcactttagctgagtggt 208
Query: 241 ggtgaca 247
|||||||
Sbjct: 207 ggtgaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
