Query= MSMg01no098_a08.b1 MSMg01no098_a08.b1 CHROMAT_FILE:
MSMg01no098_a08.b1 PHD_FILE: MSMg01no098_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:58 2005
(463 letters)
>mm_chr7_75104818_75105680
Length = 863
Score = 835 bits (432), Expect = 0.0
Identities = 453/462 (98%), Gaps = 5/462 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcttac---ttcatcatgcctagctgtgtcttacggtgttcattctctccgac 61
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttc--accagttcatcatgcctagctgtgtcttacggtgttcattctctccgac 261
Query: 62 agttctccctgcgcatcactgtactgagggaacgcacagggacgccccgccgatggttct 121
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agttctccctgggcatcactgtactgagggaacgcacagggacgccccgccgatggttct 321
Query: 122 ggtgtccactttggggcgttactggcttcgtgatgtctgttgagccacaatgtagaagag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggtgtccactttggggcgttactggcttcgtgatgtctgttgagccacaatgtagaagag 381
Query: 182 ctggatcctagagacttccgttgctaagagcggcctgtcttggctggatgctgtattctc 241
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 382 ctggatcctagagacttccgttgctaagagcggcctttcttggttggatgctgtattctc 441
Query: 242 cccatttcttctagcacgctcaccagtgagcttttcagtcaccaagattggctgcgatgg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cccatttcttctagcacgctcaccagtgagcttttcagtcaccaagattggctgcgatgg 501
Query: 302 aaggtctagttaacctcagctctgcttcctgcccttttctgaagagagtgcttaattgaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aaggtctagttaacctcagctctgcttcctgcccttttctgaagagagtgcttaattgaa 561
Query: 362 tgtttcctctcaacttcactgagtcacttgaaatcatgcagatttgcccgatcctggctc 421
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 562 tgtttcctctcaacttcactgagtcacttgaaatcatgcagatttgccccatcctggctc 621
Query: 422 cacccccatccagtccagacctgcatcccaaccctttgagta 463
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cacccccatccagtccagacctgcatcccaaccctttgagta 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_a08.g1 MSMg01no098_a08.g1 CHROMAT_FILE:
MSMg01no098_a08.g1 PHD_FILE: MSMg01no098_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:59 2005
(152 letters)
>mm_chr7_75248233_75248783
Length = 551
Score = 279 bits (144), Expect = 7e-80
Identities = 150/152 (98%), Gaps = 1/152 (0%)
Strand = Plus / Minus
Query: 1 ttctgagggggcctagttacactagccacttgatattcaccggccaaggaggcagagaag 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 351 ttctgagggggcctagttacactagccacttgatattcaccgg-gaaggaggcagagaag 293
Query: 61 ctaggagggtgggcacaaaggcagtggctctcttctacctgaggagagctggcagctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctaggagggtgggcacaaaggcagtggctctcttctacctgaggagagctggcagctcta 233
Query: 121 tcaatacggactactcctaaatgggctgcagt 152
||||||||||||||||||||||||||||||||
Sbjct: 232 tcaatacggactactcctaaatgggctgcagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 551
Length adjustment: 8
Effective length of query: 144
Effective length of database: 543
Effective search space: 78192
Effective search space used: 78192
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
