Query= MSMg01no098_c02.b1 MSMg01no098_c02.b1 CHROMAT_FILE:
MSMg01no098_c02.b1 PHD_FILE: MSMg01no098_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:08 2005
(616 letters)
>mm_chr7_131084482_131085497
Length = 1016
Score = 1147 bits (593), Expect = 0.0
Identities = 611/617 (99%), Gaps = 1/617 (0%)
Strand = Plus / Plus
Query: 1 atgtggaag-ataagctgaataaaccctttcctccccaacttgctttgtgatgttttgtg 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atgtggaagtataagctgaataaaccctttcctccccaacttgctttgtgatgttttgtg 259
Query: 60 gaggaataggaaccctgattaagacatcaccctctttgcttcctagtctccataaagtga 119
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caggagtaggaaccctgattaagacatcaccctctttgcttcctagtctccataaagtga 319
Query: 120 gaaacactacaggtttgctccccacagccatgttctatctcaccactgtcccagaatcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaaacactacaggtttgctccccacagccatgttctatctcaccactgtcccagaatcca 379
Query: 180 tggagccaagggaacaaaggctgaagcctctgaagtcatgatctgtaatcatgctctcct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggagccaagggaacaaaggctgaagcctctgaagtcatgatctgtaatcatgctctcct 439
Query: 240 tcttgaacttattttctcagatactggtcactgtcctgaaaagtctcagcaacacagtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcttgaacttattttctcagatactggtcactgtcctgaaaagtctcagcaacacagtga 499
Query: 300 ccaaaccaacacgtttactcaagagtgcttgaactttaaaattcaaacccagaattccag 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 ccaaaccaacaagtttactcaagagtgcttgaactttaaaattcaaacccagaattctag 559
Query: 360 gacccatcttccatgttctggccatctgaggactattggtcaccctgcctgatgtcctta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gacccatcttccatgttctggccatctgaggactattggtcaccctgcctgatgtcctta 619
Query: 420 gatctctgcttcctttgtttgctccagccctgttaacgtatttacatgagcctgagcaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gatctctgcttcctttgtttgctccagccctgttaacgtatttacatgagcctgagcaat 679
Query: 480 ctccttcctggcttgaggtccttacataagttgacttttctacccagctacttttccaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctccttcctggcttgaggtccttacataagttgacttttctacccagctacttttccaaa 739
Query: 540 caccctgtctggaaaatttctgtcccaggttttgagctggatgtcatataataaaaatcc 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caccctatctggaaaatttctgtcccaggttttgagctggatgtcatataataaaaatcc 799
Query: 600 ttgacaattctgtattc 616
|||||||||||||||||
Sbjct: 800 ttgacaattctgtattc 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_c02.g1 MSMg01no098_c02.g1 CHROMAT_FILE:
MSMg01no098_c02.g1 PHD_FILE: MSMg01no098_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:08 2005
(408 letters)
>mm_chr7_131249316_131250123
Length = 808
Score = 688 bits (356), Expect = 0.0
Identities = 395/410 (96%), Gaps = 6/410 (1%)
Strand = Plus / Minus
Query: 1 atggctcaatgacttgggtaaggtctaactacaacagtgtttactagaaattcttgcatt 60
||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 588 atggctctatgacctgggtaaggtctaactacaacagtgtttactagaaatccttgcatt 529
Query: 61 gatagcagactttctttatgctactaccatgtgacaacagtagatactagaaagatagga 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gatagcagtctttctttatgctactaccatgtgacaacagtagatactagaaagatagga 469
Query: 121 ccacaccatgatcagggtgtacctcatggacacatgcttaaacacttcctaggtatgtga 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ccacaccatggtcagggtgtacctcatggacacatgcttaaacacttcctaggtatgtga 409
Query: 181 acaggtgaccaggatccaagtttatctctatgaaatggctaagcatcataagtaatcttc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 408 acaggtgaccaggatccaagtttatctctatgaaatggctaagcatcataagtaattttc 349
Query: 241 tgtctttacctttctcatttaattttctactctattctgtaatgaattttactgctctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgtctttacctttctcatttaattttctactctattctgtaatgaattttactgctctac 289
Query: 301 agtttctatataataaaagacaaagccattacacagttagcatgataggctttgacaacc 360
|||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 288 agtttccatataataaaaaacaaagccattacacagttagcatgatagggtttgacaacc 229
Query: 361 atgtacttatgagttacttctac--aaaaac--aaaaacaaacaaacaaa 406
||||||||||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 228 atgtacttatgagttacttctacaaaaaaaccaaaaaacaaa--aacaaa 181
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
