Query= MSMg01no103_d23.b1 MSMg01no103_d23.b1 CHROMAT_FILE:
MSMg01no103_d23.b1 PHD_FILE: MSMg01no103_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:06 2005
(322 letters)
>mm_chr7_136712979_136713700
Length = 722
Score = 460 bits (238), Expect = e-134
Identities = 303/328 (92%), Gaps = 10/328 (3%)
Strand = Plus / Minus
Query: 3 ggaattccagaatccatgactttaaa-ggaattcccagg-tcatcagctgcctagtgagt 60
|||||||||||||||| || |||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 638 ggaattccagaatccaggaatttaaagggaa-gccc-ggatcatccgctgcctagtgagt 581
Query: 61 tggaggccagcttggatgacatgcaattctaactcaaaagaaaaataaaggg------ca 114
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 580 tggaggccagtttggatgacatgcaattctaactcaaaagaaaaataaagggcaaatcca 521
Query: 115 atagaaatacgaggaaaagaaaatgaatggccattctccgaggagaaatccttcacagcc 174
||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 520 atagaaatatgaggaaaagaaaatgaatggccattctctgagaagaaatccttcacagcc 461
Query: 175 aagagacatggaaaaatattaccaagtccttgtataaagaagtgaatttcagagtttaac 234
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 460 aagagacatggaaaaatattatcaagtccttgtagaaagaagtgaatttcagagttaaac 401
Query: 235 tgcagaacccccacacccatgcatttagggtgactgacaaagtgctggcttgtatgcatg 294
||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||
Sbjct: 400 tgcagaacccccacacccatgcatttagggtgactgacaaaccgctggcatggatgcatg 341
Query: 295 gggaggggcttcccattgctggggaggc 322
||||||||||||||||||||||||||||
Sbjct: 340 gggaggggcttcccattgctggggaggc 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_d23.g1 MSMg01no103_d23.g1 CHROMAT_FILE:
MSMg01no103_d23.g1 PHD_FILE: MSMg01no103_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:06 2005
(296 letters)
>mm_chr7_136575509_136576205
Length = 697
Score = 536 bits (277), Expect = e-157
Identities = 292/297 (98%), Gaps = 1/297 (0%)
Strand = Plus / Plus
Query: 1 agagaagagagagcacaggagttattaaaattaaagatgaggttggctcagacaggagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaagagagagcacaggagttattaaaattaaagatgaggttggctcagacaggagtg 260
Query: 61 gacctggcagagcagagtcagaggctgccaggtgtgggaggtcttccttttggagagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacctggcagagcagagtcagaggctgccaggtgtgggaggtcttccttttggagagcct 320
Query: 121 tccttgcttcttgggaaggtaacctgggggg-aggggtacttgttcagatctttccctta 179
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 321 tccttgcttcttgggaaggtaacctgggggggaggggtacttgttcagacctttccctta 380
Query: 180 atgaaagccctgactttgagaagacatttataaatcataccccacccataactcctctga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaaagccctgactttgagaagacatttataaatcataccccacccataactcctctga 440
Query: 240 agagctaaaagacttcctattgtatgttttacaaagcatttctctcagccacggata 296
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 441 agagctaaaagacttcctacagtatgttttaccaagcatttctctcagccacggata 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 697
Length adjustment: 9
Effective length of query: 287
Effective length of database: 688
Effective search space: 197456
Effective search space used: 197456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
