Query= MSMg01no115_a03.b1 MSMg01no115_a03.b1 CHROMAT_FILE:
MSMg01no115_a03.b1 PHD_FILE: MSMg01no115_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:50 2005
(532 letters)
>mm_chr7_26446945_26447877
Length = 933
Score = 1000 bits (517), Expect = 0.0
Identities = 526/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Minus
Query: 5 gaattcagttctcagcacccattatcaggctgctcacaaccaccacgaaacccagctcta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gaattcagttctcagcacccattatcaggctgctcacaaccaccacgaaacccagctcta 804
Query: 65 agggactgacaccctcttctgccttcatgggcactcgcacacacagctctcgcccacaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agggactgacaccctcttctgccttcatgggcactcgcacacacagctctcgcccacaca 744
Query: 125 cgcatatacatatcccagtgtttgggagacacacaggaagatcaggaaatcaagatcatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 743 cgcatatacatatcccagtgtttgggagacacacaggaagatcaggaaatcaaaatcatc 684
Query: 185 cttggctccaatggtaagtctggggctaccctgagctacgggagaacatctcataagcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cttggctccaatggtaagtctggggctaccctgagctacgggagaacatctcataagcca 624
Query: 245 gccaagcagaaaacagttattagatgcaattaaaatatattagtaaaatacattttaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gccaagcagaaaacagttattagatgcaattaaaatatattagtaaaatacattttaaaa 564
Query: 305 ggacaaacaataaagattgtgaatgtgtagggggtcttaatttctacttatt-cccccaa 363
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 563 ggacaaacaataaagattgtgaatgtgtagggggtcttaatttctacttatttcccccaa 504
Query: 364 atggttatgaatgggtctggagacctcgtgtgactttgctaacgtccacaggcgtcagag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atggttatgaatgggtctggagacctcgtgtgactttgctaacgtccacaggcgtcagag 444
Query: 424 aggccacctacgatgtgaaggcactgcattcaacagcagtttccatgtttctgactgtaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aggccacctacgatgtgaaggcactgcattcaacagcagtttccatgtttctgactgtaa 384
Query: 484 ctcccaatgcccactacactttacagcacagctcccaatcgataaaatg 532
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 ctcccaatgcccactacactttacagcacagctccaaatcgataaaatg 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_a03.g1 MSMg01no115_a03.g1 CHROMAT_FILE:
MSMg01no115_a03.g1 PHD_FILE: MSMg01no115_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:50 2005
(502 letters)
>mm_chr7_26303593_26304494
Length = 902
Score = 932 bits (482), Expect = 0.0
Identities = 497/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Plus
Query: 1 taggagtcatagccagaaattaaccacagggcagagataatcccaacacacactcttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggagtcatagccagaaattaaccacagggcagagataatcccaacacacactcttgta 260
Query: 61 gtagactcatgggactcagtgaccagtctgtctttctgtgcagtattgaggagtagagac 120
|||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||
Sbjct: 261 gtagactcatgggactcattgaccagtctatctttctgtgcagcgttgaggagtagagac 320
Query: 121 ccatactggatttcacagttgtgtctcttcaagaatacttttctcagcttggtgtggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatactggatttcacagttgtgtctcttcaagaatacttttctcagcttggtgtggtag 380
Query: 181 cacacacttgtcatcccagcacatgaaaggctaaggcaagtgtatggccacagttcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacacttgtcatcccagcacatgaaaggctaaggcaagtgtatggccacagttcaaga 440
Query: 241 ccagccttggttacatagttcaaaggttgccaagactgcatggtgagatcctgtctcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagccttggttacatagttcaaaggttgccaagactgcatggtgagatcctgtctcaac 500
Query: 301 aaagaaatcaaaacaatacagatatcccaagtttcctcagagacattttgtagcacaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagaaatcaaaacaatacagatatcccaagtttcctcagagacattttgtagcacaaac 560
Query: 361 agccagcaaaagtggcagtgctcaccttgttaggagagttgtcagaaggagccagatcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccagcaaaagtggcagtgctcaccttgttaggagagttgtcagaaggagccagatcta 620
Query: 421 ggggaggaagagagagttatcagtgcacatgaataaggctttgtgatttctagcaggtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggggaggaagagagagttatcagtgcacatgaataaggctttgtgatttctagcaggtgg 680
Query: 481 agtggggtgcgggtagagggga 502
||||||||| ||||||||||||
Sbjct: 681 agtggggtg-gggtagagggga 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
