TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTGCCGTCCCGAACTAGGTCGGGCAAGAGGAATGCATCTTAGAAAGG
GGAAATTCCCAGCCGATTCACTGTCTGTCCTCAGTATTAGACTTTTAGGT
TGTGAAGCAGAGACTGTTAACTCAACTGCCTGGAATTTGGAGAATGAGTA
TAGCCTGTGATATTAACCTCCTTAATTTTGTTAATTTATGGGAACTTGGC
AGGACTAGCATCACTGAAACAAATATGTTTCTAGGGGATTATCTAATCTG
AGGAGGGGCAGACTCAATCCAAATCTGAATAGCACTCGTCCATGGCTATG
AACTGGTTAGGAAGTTGACAGGTGCATCAGTTTCTCTTTGCTTCCTAACT
GGATGCAATTTCAACAACTTTTAAAAACTTCTGCCCCCATGATTTCCTAC
CATAAAGGGCTGTACCATCAAACTGTAAACCAGAATAAAACCTTGCACCC
TTAAGTTGCTGTTGTTAGCTGTTTTACCTCATGACAAAGTTACACACAGT
CTGTCTGCTTCCTGAGAGGCACACCATCTGCCACAAGCTTTATGTTTCAT
ATGTTTTGCTGGAAGAAAACACCCCCACCACCCCCCAGGACTTGAGATCA
ATAAAGGATATTGTAAATTTTTTCAGCAGCCTCCTTCAGAGCTCCTA

NNAACGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCATC
TTTTAAGGGGGCTATTTGATTTTCTGGCAAGCCTTTGTTGCAAGGACGGT
GATATAGCTGTCACTTGTGAGACTAGGCCGGGGCCTAGCAAATACAGAAG
TGGATGCTCACAGTCAACTATTGGATGGATCACAGGGCCCCCAATGGAGG
AGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACCCTATCAGAG
GAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTCTAGCTGC
ATATGTATCAAAAGATGATCTAGTTGGCCATCACTGGAAAGAGAGGCCCA
TTGGTCAGGCAAACGTTATATGCCCCAGTACAGGGGAATGCCAGGGTCAA
AAAATGGGAATGGGTGGGTAGGGGAGTGGGGGGGCCTCCCCTTTCCCCCC
CCCCTACCTTTTTCTTTCTTCATTCCTTTCTTTTTCTCCTTTCACTACGT
ATTAACTATCAACTTCTTCATCCTTCTCCTTCTCTATCTCCCCCTCTCAC
ATCACTCTAATCCCTACTCTTCCCCCATCCCCACAATTCCTCTCCACAAA
TCACACTTTCTTTCCCCCTCTCCCTCTCTTCTCCTACCTTTCATCCCCAC
TCAACTCACCTC

Query= MSMg01no117_b04.b1 MSMg01no117_b04.b1 CHROMAT_FILE:
MSMg01no117_b04.b1 PHD_FILE: MSMg01no117_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:30 2005
         (646 letters)



>mm_chr7_100503626_100504673
          Length = 1048

 Score = 1098 bits (568), Expect = 0.0
 Identities = 633/672 (94%), Gaps = 32/672 (4%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgccgtcccga-actaggtcgggcaagaggaatgcatcttagaaaggggaaat 63
           |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gaattcttgccggccagatactaggtcgggcaagaggaatgcatcttagaaaggggaaat 238

                                                                       
Query: 64  tcccagccgattcactgtctgtcctcagtattagacttttaggttgtgaagcagagactg 123
           |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 239 tcccagcccattcactgtctgtcctcagtattacacttttaggttgtgaagcagagact- 297

                                                                       
Query: 124 ttaactcaactgcctggaatttggagaatgagtatagcctgtgatattaacctccttaat 183
           ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 298 ttaactcaact-cctggaatttggagaatgagtatagcctgtaatattaacctccttaat 356

                                                                       
Query: 184 tttgttaatttatgggaacttggcaggactagcatcactgaaacaaatatgtttctaggg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttgttaatttatgggaacttggcaggactagcatcactgaaacaaatatgtttctaggg 416

                                                                       
Query: 244 gattatctaatctgaggaggggcagactcaatccaaatctgaatagcactcgtccatggc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gattatctaatctgaggaggggcagactcaatccaaatctgaatagcactcgtccatggc 476

                                                                       
Query: 304 tatgaactggttaggaag---------------------------ttgacaggtgcatca 336
           ||||||||||||||||||                           |||||||||||||||
Sbjct: 477 tatgaactggttaggaagaaaaatgctttaatagcatagattgagttgacaggtgcatca 536

                                                                       
Query: 337 gtttctctttgcttcctaactggatgcaatttcaacaacttttaaaaacttctgccccca 396
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 537 gtttctctttgcttcctaactggatgcaatatcaacaacttttaaaaacttctgccccca 596

                                                                       
Query: 397 tgatttcctaccataaagggctgtaccatcaaactgtaaaccagaataaaaccttgcacc 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tgatttcctaccataaagggctgtaccatcaaactgtaaaccagaataaaaccttgcacc 656

                                                                       
Query: 457 cttaagttgctgttgttagctgttttacctcatgacaaagttacacacagtctgtctgct 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cttaagttgctgttgttagctgttttacctcatgacaaagttacacacagtctgtctgct 716

                                                                       
Query: 517 tcctgagaggcacaccatctgccacaagctttatgtttcatatgttttgctggaagaaaa 576
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tcctgagaggcacaccatctgccacaagctttatgtttcatatgttttgctggaagaaaa 776

                                                                       
Query: 577 cac-ccccac-caccccccaggacttgagatcaataaaggatattgtaaattttttcagc 634
           ||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cacgccccccgcaccccccaggacttgagatcaataaaggatattgtaaattttttcagc 836

                       
Query: 635 agcctccttcag 646
           ||||||||||||
Sbjct: 837 agcctccttcag 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1048
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1038
Effective search space:   660168
Effective search space used:   660168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)