Query= MSMg01no117_c16.b1 MSMg01no117_c16.b1 CHROMAT_FILE:
MSMg01no117_c16.b1 PHD_FILE: MSMg01no117_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:37 2005
(354 letters)
>mm_chr7_38897345_38898098
Length = 754
Score = 669 bits (346), Expect = 0.0
Identities = 352/354 (99%)
Strand = Plus / Minus
Query: 1 aaagccagacaagcaaagagaacaggttggtccctaaattagaaataaagatacggggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 698 aaagccagacaagcaaagagaacaggttggtccctaaattagaaataaagatatggggca 639
Query: 61 aaatgacaatcataacaatactaagagtagtaatgaataacggtgatgatgatgatggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aaatgacaatcataacaatactaagagtagtaatgaataacggtgatgatgatgatggtg 579
Query: 121 gtggtgatgacgatgataaagatgcgaaacggggagcttcctgcagttgttgtgcacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gtggtgatgacgatgataaagatgcgaaacggggagcttcctgcagttgttgtgcacaga 519
Query: 181 tgtgggctcaactttgccaaattattccattgtcccacgagtcggaaaccctcatgcaca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 518 tgtgggctcaactttgccaaattattccattgtcccacgagtcggaaaccctcatgcata 459
Query: 241 caggaattcacatttttgccgtttttcagtgggctgccagcacctgtctgtgtgtaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 caggaattcacatttttgccgtttttcagtgggctgccagcacctgtctgtgtgtaactt 399
Query: 301 ctgttggttgccaggccgattgtaagtggattccaacgtgacagatgacagcga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ctgttggttgccaggccgattgtaagtggattccaacgtgacagatgacagcga 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_c16.g1 MSMg01no117_c16.g1 CHROMAT_FILE:
MSMg01no117_c16.g1 PHD_FILE: MSMg01no117_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:38 2005
(538 letters)
>mm_chr7_38742378_38743315
Length = 938
Score = 1025 bits (530), Expect = 0.0
Identities = 536/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 1 taaaaaagccccctggagactatctgccacttgtctaaagaacatgtgcgtacagattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaaaaagccccctggagactatctgccacttgtctaaagaacatgtgcgtacagattag 260
Query: 61 ctttagtcgtgaaaagcttcttcacacagaagccaaatttgtaaataagtatgtaactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttagtcgtgaaaagcttcttcacacagaagccaaatttgtaaataagtatgtaactga 320
Query: 121 atttgacacactttaaaatattccaatacgggtatgggggacttttggggtagcattgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttgacacactttaaaatattccaatacgggtatgggggacttttggggtagcattgga 380
Query: 181 aatgtaaatgaggaagatacctaataaaaaattaaaaaaaaatattccaatacatagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgtaaatgaggaagatacctaataaaaaattaaaaaaaaatattccaatacatagaaa 440
Query: 241 actgtaagttactatcattaattggaaataaatagtatttttaaaatgttggtaatttgg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgtaagttacaatcattaattggaaataaatagtatttttaaaatgttggtaatttgg 500
Query: 301 tacttgttaccaaatttttaattccctctaagatcctatactgtcccaaatcaatattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacttgttaccaaatttttaattccctctaagatcctatactgtcccaaatcaatattta 560
Query: 361 agaaattattagggagataacttagtggataaagtgattggcatgcaagcatgaacatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaattattagggagataacttagtggataaagtgattggcatgcaagcatgaacatca 620
Query: 421 gtttgacccctagcatcatgaaaatgtcaagtgggtatggaaccacccccccccagaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 gtttgacccctagcatcatgaaaatgtcaagtgggtatggaaccacccccccc-agaata 679
Query: 481 aatatgtgtatagacatatatatatacatgagtacacatgccaaaaatttttttcaat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatatgtgtatagacatatatatatacatgagtacacatgccaaaaatttttttcaat 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
