Query= MSMg01no122_f08.b1 MSMg01no122_f08.b1 CHROMAT_FILE:
MSMg01no122_f08.b1 PHD_FILE: MSMg01no122_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:40 2005
(696 letters)
>mm_chr7_130691629_130692724
Length = 1096
Score = 1301 bits (673), Expect = 0.0
Identities = 691/697 (99%), Gaps = 2/697 (0%)
Strand = Plus / Minus
Query: 1 actcctaaaggagaggcattataagcaattttacct-attgcagcttttcaggtggcaaa 59
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 896 actcctaaaggagaggcattataagcaatttta-gtaattgcagcttttcaggtggcaaa 838
Query: 60 tgaaagaggcatcccctacagactagagtcaagaactcaagcatcattagtcaatcattg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tgaaagaggcatcccctacagactagagtcaagaactcaagcatcattagtcaatcattg 778
Query: 120 acatctcttcatgaagctcagtaaatagacatttttcagaggacttggcaagaagccaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acatctcttcatgaagctcagtaaatagacatttttcagaggacttggcaagaagccaac 718
Query: 180 ttcttcaacaaccttcctctttgaacaaggagagtaaagaaactcctgaagaatttctcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttcttcaacaaccttcctctttgaacaaggagagtaaagaaactcctgaagaatttctcc 658
Query: 240 tagacaagacacaaatatgtgctagaaggctgtcctactgcttcaacccatgagaagctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tagacaagacacaaatatgtgctagaaggctgtcctactgcttcaacccatgagaagctg 598
Query: 300 gggccactctgacctcagcatgtcttctgtcagatttgtctcagatgcctgagtctgggc 359
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 597 gggccactctgacctcagcatggcttctgtcagatttgtctcagatgcctgagtctgggc 538
Query: 360 aggaagtgataacatggtatagaattgaaagtcaaagttatcagtgaaagctaaccacat 419
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 537 aggaagtgataacatggtatagaattgaaagtcaaagttatcggtgaaagctaaccacat 478
Query: 420 actctgactcttcatctgatgtataacaatgtagacagcaaaaacacatttgaacaagtt 479
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 actctgactcttcgtctgatgtataacaatgtagacagcaaaaacacatttgaacaagtt 418
Query: 480 ttggtgtatggttttttaaaaagcttgagggccctgccgagattcctcaattcattttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttggtgtatggttttttaaaaagcttgagggccctgccgagattcctcaattcattttga 358
Query: 540 acttcccaggtaccactctagggaagtcactgtgcacacagtccttgatttactatcatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 acttcccaggtaccactctagggaagtcactgtgcacacagtccttgatttactatcatt 298
Query: 600 caacttagaatttttcaaccttaggactgagcatagtcactatacagtcagtagcagctg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 caacttagaatttttcaaccttaggactgagcatagtcactatacagtcagtagcagctg 238
Query: 660 tgtgtccaatcaattttgttcttttcccaatcagcca 696
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 tgtgtccaatcaattttgttcttttcccaatcagcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_f08.g1 MSMg01no122_f08.g1 CHROMAT_FILE:
MSMg01no122_f08.g1 PHD_FILE: MSMg01no122_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:40 2005
(705 letters)
>mm_chr7_130555695_130556799
Length = 1105
Score = 1303 bits (674), Expect = 0.0
Identities = 698/708 (98%), Gaps = 5/708 (0%)
Strand = Plus / Plus
Query: 1 ggcctaccagtcttgaatggaagcctccctaa---acactgtgtgctgaagtagcctttt 57
||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 200 ggcctaccagtcttgaatggaagcctc--taacaaacactgtgtgctgaagtagcctttt 257
Query: 58 ctgtatgagctggctctcgtgtgttacagagtggagagagaacacagttggggaagtctg 117
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 258 ctgtatgagctggctctcgtgtgttacagagtggagagagaacacagtcggggaagtctg 317
Query: 118 agggcatgcctgggtcttccactccatggatctccaattatagcatgtagcatagtctcc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agggcatgcctgggtcttccactccatggatctccaattatagcatgtagcatagtctcc 377
Query: 178 tttggctgaatataacatattgattcaaggacactggtttccttaggcttgtgcttagag 237
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tttggctgaatataacgtattgattcaaggacactggtttccttaggcttgtgcttagag 437
Query: 238 agcatgttagtgagagtcacagggaatggaatcggatgtcctacctgagcatagtgccaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agcatgttagtgagagtcacagggaatggaatcggatgtcctacctgagcatagtgccaa 497
Query: 298 ccttttaatgaactagctatttgacaatggtcctttaaaatatattttttaatttatttg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccttttaatgaactagctatttgacaatggtcctttaaaatatattttttaatttatttg 557
Query: 358 gtccttagttcttttctacattgtgaaatgggataaatactgtatcaccaaatggatttg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtccttagttcttttctacattgtgaaatgggataaatactgtatcaccaaatggatttg 617
Query: 418 aagatttgatgaagaaatgcatgtgagggtgggagaacagaaagaagtgtgcactggtta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aagatttgatgaagaaatgcatgtgagggtgggagaacagaaagaagtgtgcactggtta 677
Query: 478 cttatggagtaagccacgcctcagtctgacttcagctctagggacctgtggcttctgcag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cttatggagtaagccacgcctcagtctgacttcagctctagggacctgtggcttctgcag 737
Query: 538 tggtgggacagagcagggaatcaccagctcgtgagcgagctgacaacggggaaattggcc 597
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 738 tggtgggacagagcagggaatcaccagctcgtgagcgagctgacgacgggggaattggcc 797
Query: 598 tcccttttggaacttagtaccaatggagaagagcagtgttacaacaagtgtgagagctgt 657
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tcccttttggaactcagtaccaatggagaagagcagtgttacaacaagtgtgagagctgt 857
Query: 658 gctgatttcccaggtggcttccttatcttttcactgcttgcttttcca 705
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gctgatttcccaggtggcttccttatcttttcactgcttgcttttcca 905
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 705
Length of database: 1105
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1095
Effective search space: 761025
Effective search space used: 761025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
