Query= MSMg01no122_n18.b1 MSMg01no122_n18.b1 CHROMAT_FILE:
MSMg01no122_n18.b1 PHD_FILE: MSMg01no122_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:48 2005
(678 letters)
>mm_chr7_57534096_57535174
Length = 1079
Score = 1234 bits (638), Expect = 0.0
Identities = 668/678 (98%), Gaps = 1/678 (0%)
Strand = Plus / Plus
Query: 2 aatgaatgcctataagcattgccatggttacagtttattaatatgaataaagacatctac 61
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 202 aatgaatgcctataagcactgccatggttagagtttattaatatgaataaagacatctac 261
Query: 62 aggtatatatatacagaatgattatacgatgggaggttgaagatggcaaaaactgaatat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aggtatatatatacagaatgattatacgatgggaggttgaagatggcaaaaactgaatat 321
Query: 122 ttgtttagaaataagcatcagtgtatgaaaagatcatagctatgtacaaagtagtgaagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttgtttagaaataagcatcagtgtatgaaaagatcatagctatgtacaaagtagtgaagc 381
Query: 182 ctggcagaaagagaggctctataatgataacactcacattagattaattgtatctcctat 241
| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 382 ccggcagaaagagaggctctataatgttaacactcacattagattcattgtatctcctat 441
Query: 242 acccatatatgtaggccatgcattcttttctacacatcataaattatctactaagataat 301
|||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acccatatatttgggtcatgcattcttttctacacatcataaattatctactaagataat 501
Query: 302 tataacaatgtaagaagcaacaagactgcacagattggcttgggtacaatacccagacag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tataacaatgtaagaagcaacaagactgcacagattggcttgggtacaatacccagacag 561
Query: 362 gaagtagcttagcaaggtaagcagtgccaggcacatcaggaaacatgctctcatacacag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaagtagcttagcaaggtaagcagtgccaggcacatcaggaaacatgctctcatacacag 621
Query: 422 gacagtccagagtttctccttcctgccctatagctcctacgaggcttaatcttgcatgtt 481
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 622 gacagtccagagtttctccttcctgccctatagctcctactaggcttaatcttgcatgtt 681
Query: 482 catggatctatttctgtgatccctatgtcatatacaatactgtgtgccttattgttggag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 catggatctatttctgtgatccctatgtcatatacaatactgtgtgccttattgttggag 741
Query: 542 gctcttccttcttgtcattcctccatgtaaaacattctttctgtc-tgtaggtcataact 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 742 gctcttccttcttgtcattcctccatgtaaaacattctttctgtcctgtaggtcataact 801
Query: 601 tctgtgcagaagcacctaagtgtggagaaaactcggaatgcaaaaattggaatacaaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tctgtgcagaagcacctaagtgtggagaaaactcggaatgcaaaaattggaatacaaaag 861
Query: 661 cgacttgtgagtgcaaga 678
||||||||||||||||||
Sbjct: 862 cgacttgtgagtgcaaga 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1079
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1069
Effective search space: 714092
Effective search space used: 714092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_n18.g1 MSMg01no122_n18.g1 CHROMAT_FILE:
MSMg01no122_n18.g1 PHD_FILE: MSMg01no122_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:48 2005
(641 letters)
>mm_chr7_57703042_57704082
Length = 1041
Score = 1220 bits (631), Expect = 0.0
Identities = 638/641 (99%), Gaps = 2/641 (0%)
Strand = Plus / Minus
Query: 1 ctgctcatgtgtctgactgagacatgctttaatccatctgttaccaaatgaagctgcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ctgctcatgtgtctgactgagacatgctttaatccatctgttaccaaatgaagctgcagc 710
Query: 61 catttcctccacactgtaccctagattgaagacagcaactgatttgggggaatgcaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 catttcctccacactgtaccctagattgaagacagcaactgatttgggggaatgcaaaaa 650
Query: 121 tctgcactttggtgctttgacctggagatgtgtaccaggtgatgagctcactcaacagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tctgcactttggtgctttgacctggagatgtgtaccaggtgatgagctcactcaacagac 590
Query: 181 catagcattctctttgggatggaggtcagagagacacctgctttctaaaagtaattcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 catagcattctctttgggatggaggtcagagagacacctgctttctaaaagtaattcctg 530
Query: 241 atgaagatgaaaataccttaccactgtaaacattgggttcagtcttttctagaagttagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atgaagatgaaaataccttaccactgtaaacattgggttcagtcttttctagaagttagg 470
Query: 301 ttttcagattttgatttatgttcattgtgttcaaagtacaattacataattattggtggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttttcagattttgatttatgttcattgtgttcaaagtacaattacataattattggtggg 410
Query: 361 gttgttaaaaacaacacagaaacccaagacagaaaagtgtgagatctagttcagggtctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gttgttaaaaacaacacagaaacccaagacagaaaagtgtgagatctagttcagggtctg 350
Query: 421 atagtcactatcagagacttgcatttgacactctgaacctttaggcccttatcagcttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atagtcactatcagagacttgcatttgacactctgaacctttaggcccttatcagcttgt 290
Query: 481 cctttgtggcagttctgatacaaatgctgtgtgcctcctaagcatcaacgagcttgattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cctttgtggcagttctgatacaaatgctgtgtgcctcctaagcatcaacgagcttgattc 230
Query: 541 gaatgtaactccactatcaaagtgtacacatcacttctattttaaagtctagaaaatgag 600
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 229 gaatgtaactccactatcaaagtgtacacatcacctctattttaaagtctagaaaatgag 170
Query: 601 gttcaaagaagttaaattatctgtcagagtcaccccactta 641
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 169 gttcaaagaagttaaattatctgtc--agtcaccccactta 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
