Query= MSMg01no128_i04.b1 MSMg01no128_i04.b1 CHROMAT_FILE:
MSMg01no128_i04.b1 PHD_FILE: MSMg01no128_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:37 2005
(334 letters)
>mm_chr7_68163677_68164410
Length = 734
Score = 601 bits (311), Expect = e-176
Identities = 329/335 (98%), Gaps = 2/335 (0%)
Strand = Plus / Plus
Query: 1 atacatatttcttcatgaaggaatgtgataagaaaagtaaaaaaaattt-tattttatct 59
|||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 201 atacatatttcttcatgaaggaatgtgataagaaaagtaaaaaaaaattgt-ttttatct 259
Query: 60 ttatctaggcggcttatgacaagttaacagataagtaacctgaatgattaagtgtaactc 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttatctaggcagcttatgacaagttaacagataagtaacctgaatgattaagtgtaactc 319
Query: 120 atgaaggatactcaagagagagaacctgagaacagtcatgcttgtattccttcttactgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgaaggatactcaagagagagaacctgagaacagtcatgcttgtattccttcttactgt 379
Query: 180 taaactcatattcaaatgaatgcttatgtagtataaaatgatcaatatttataatatcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaactcatattcaaatgaatgcttatgtagtataaaatgatcaatatttataatatcat 439
Query: 240 tgatgcaattataatgatagtatagtgacagtgacagttttatagatattcactagatag 299
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 440 tgatgtaattataatgatagtatagtgacagtgatagttttatagatattcactagatag 499
Query: 300 gaaatatatgatagtatagtgacagtttgatagtt 334
|||||||||||||||||||||||||||||||||||
Sbjct: 500 gaaatatatgatagtatagtgacagtttgatagtt 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_i04.g1 MSMg01no128_i04.g1 CHROMAT_FILE:
MSMg01no128_i04.g1 PHD_FILE: MSMg01no128_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:38 2005
(436 letters)
>mm_chr7_68307654_68308489
Length = 836
Score = 814 bits (421), Expect = 0.0
Identities = 433/437 (99%), Gaps = 1/437 (0%)
Strand = Plus / Minus
Query: 1 gtttaagaaat-gcatattaagagaaataaatttggaagcacatatgtaaataaaataat 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtttaagaaatggcatattaagagaaataaatttggaagcacatatgtaaataaaataat 682
Query: 60 atttctgacacacaacacatacacatagacacacacacacaaacattatacatatacata 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttctgacacacaacatatacacatagacacacacacacaaacattatacatatacata 622
Query: 120 tatgcaatatgtatatcataacatatataatattaattacagccaaatacctatataaat 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatgcaatatgtatatcataatatatataatattaattacagccaaatacctatataaat 562
Query: 180 caatttatttaaaaaatacccactacagattttacaaatattctccatgtatttctttat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caatttatttaaaaaatacccactacagattttacaaatattctccatgtatttctttat 502
Query: 240 ttctgaaattataattaaaatttcccctattctattcgccattcattcctcttttttcat 299
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ttctgaaattataattaaaatttcccctattctattctccattcattcctcttttttcat 442
Query: 300 cttatttcattttcaaattcacaaaatatttcctttttaagtatttctacatacatatat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttatttcattttcaaattcacaaaatatttcctttttaagtatttctacatacatatat 382
Query: 360 ttgcaagtatagctatgcttcttcttaaaaaactaaatacagaaaccttagtttatataa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcaagtatagctatgcttcttcttaaaaaactaaatacagaaaccttagtttatataa 322
Query: 420 tgatacatatattttca 436
|||||||||||||||||
Sbjct: 321 tgatacatatattttca 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
