Query= MSMg01no129_l24.b1 MSMg01no129_l24.b1 CHROMAT_FILE:
MSMg01no129_l24.b1 PHD_FILE: MSMg01no129_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:17 2005
(563 letters)
>mm_chr7_79079410_79080372
Length = 963
Score = 1046 bits (541), Expect = 0.0
Identities = 556/561 (99%)
Strand = Plus / Plus
Query: 1 tcttactacacaaaaacaatcatctgtcatccaatggacttacaacgttgatatctctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttactacacaaaaacaatcatctgtcatccaatggacttacaacgttgatatctctaa 260
Query: 61 ctcttcaacttaatttctttgcattttatggagaacatattgattctaactaggttgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttcaacttaatttctttgcattttatggagaacatattgattctaactaggttgttc 320
Query: 121 ttcaaataacttaaatataccctgctccttagtaacaacatcaacaaccataataaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaaataacttaaatataccctgctccttagtaacaacatcaacaaccataataaaaag 380
Query: 181 caattgtactcttttataatgattattatagagcaaacatttatgcaacaatttgagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 caattgtactcttttataatgattattatagagcaaacatttatgcaacaatttgagcac 440
Query: 241 atgattaatctttaccttagtctatggcaatgcaattcatttcctgtttaacagcgagaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 atgattaatctttaccttagtctatggcaatgcaattcatttcctgtttaacagtgagaa 500
Query: 301 atctgaggctcagggactttcaaatgaatggcctaaagttgtttagctaataagtgacaa 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctgaggctcagggactttctaatgaatggcctaaagttgtttagctaataagtgacaa 560
Query: 361 aggtgagttctgaagtcatggattcttctgctgtataagtatagacttctaacatcttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggtgagttctgaagtcatggattcttctgctgtataagtatagacttctaacatcttac 620
Query: 421 tacatgaaactgctttcctaggctacagagaggggaagaatgaaaaccatcagaaaccca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacatgaaactgctttcctaggctacagagaggggaagaatgaaaaccatcagaaaccca 680
Query: 481 gtggtgccaatggccagccggagaacgagccctgcctgtggctctccttcaggactctgt 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtggtgccaatggccagccagagaacgagccctgcctgtggctctccttcaggactctgt 740
Query: 541 gggatctggagctccacacgt 561
|||||||||||||||||||||
Sbjct: 741 gggatctggagctccacacgt 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_l24.g1 MSMg01no129_l24.g1 CHROMAT_FILE:
MSMg01no129_l24.g1 PHD_FILE: MSMg01no129_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:17 2005
(351 letters)
>mm_chr7_79220856_79221606
Length = 751
Score = 555 bits (287), Expect = e-162
Identities = 334/361 (92%), Gaps = 22/361 (6%)
Strand = Plus / Minus
Query: 1 ttctaagtcagttatagtgttcctgataaaagcaaatggtgtcctggacttcgatattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 482 ttctaagtcagttatagtgttcctgataaaagcaaatggtgtcctggactttgatattgc 423
Query: 61 tgcatagtgatagaaagtataaaagtctaattgggagattataagaaatgagaaattggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgcatagtgatagaaagtataaaagtctaattgggagattataagaaatgagaaattggc 363
Query: 121 atgttcttgactggggagacagcagggttaaagatgactatttgattcaagcaaacaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgttcttgactggggagacagcagggttaaagatgactatttgattcaagcaaacaaat 303
Query: 181 gttaataatttacaggcttccttcaagtctagagagagaacgtggaatggacacaaaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gttaataatttacaggcttccttcaagtctagagagagaacgtggaatggacacaaaagc 243
Query: 241 tgacaaaaagagaattcaaacccggacagctgatacacacag------taaatactatgt 294
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 242 tgacaaaaagagaagtcaaacccggacagctgatacacacagagagagtaaatactatgt 183
Query: 295 ttgatgc--c--ccccccccca----actgcataatggccatttatgtaaaatggtcctg 346
||||| | | | |||||||||||||||||||||||||||||| |||
Sbjct: 182 cagatgctacgtc--------atttaactgcataatggccatttatgtaaaatggttctg 131
Query: 347 a 347
|
Sbjct: 130 a 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
