Query= MSMg01no131_a20.b1 MSMg01no131_a20.b1 CHROMAT_FILE:
MSMg01no131_a20.b1 PHD_FILE: MSMg01no131_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:08 2005
(623 letters)
>mm_chr7_25277736_25278758
Length = 1023
Score = 1141 bits (590), Expect = 0.0
Identities = 616/626 (98%), Gaps = 3/626 (0%)
Strand = Plus / Minus
Query: 1 cctagtgacagagcataagagtaacagaacccagcacttggaaggcagacgcaggcggat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 996 cctagtgacagagcataagagtaacagaacccagcacttggaaggcagaggcaggcggat 937
Query: 61 ttctgagttcaaggccagcctggtctacaaagtgagttccaggacagccagggctacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ttctgagttcaaggccagcctggtctacaaagtgagttccaggacagccagggctacaca 877
Query: 121 gagaaaccctgtcttgaaaaaccaaaaaaaaaaaaaaaaaataaaataa---agtaacag 177
||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 876 gagaaaccctgtcttgaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaagagtaacag 817
Query: 178 aactaagttgaaagagcatgagtctttggtggcaatgtggagcagccacgccttttaact 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 aactaagttgaaagagcatgagtctttggtggcaatgtggagcagccacgccttttaact 757
Query: 238 ctggactgcttttatgcggatagtatctaagccaccctctgaattttacctcccagagtg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ctggactgcttttatgcggatagtatctaagccaccctctgaattttacctcccagagtg 697
Query: 298 acaaacaaagcattccgcccttacctatgcggtttataggttcagcacgcgccacaaacc 357
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 696 acaaacaaagcattccgcccttacctatgcggtttataggttcagtaggtgccacaaacc 637
Query: 358 acccactccgttgctcaggccaaaggacagcaagccacccaagcgtccgaccgttccctc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 acccactccgttgctcaggccaaaggacagcaagccacccaagcgtccgaccgttccctc 577
Query: 418 agccctcacacccacccctccagaaccgtctgcatattttacctctaaaatatatctgaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agccctcacacccacccctccagaaccgtctgcatattttacctctaaaatatatctgaa 517
Query: 478 tctgtttggccttgtctgcctcacctccgagcaccctctcctggtattgtccctctctca 537
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 516 tctgtttggccttgtctgcctcacctccgagcaccctctcctggtatcgtccctctctca 457
Query: 538 tctggatctctcaagatccagacctgtttgtggatctcaacttccaagcctgcctctcac 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tctggatctctcaagatccagacctgtttgtggatctcaacttccaagcctgcctctcac 397
Query: 598 acctaggctgacctgtaacacgtgac 623
||||||||||||||||||||||||||
Sbjct: 396 acctaggctgacctgtaacacgtgac 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_a20.g1 MSMg01no131_a20.g1 CHROMAT_FILE:
MSMg01no131_a20.g1 PHD_FILE: MSMg01no131_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:08 2005
(444 letters)
>mm_chr7_25175296_25176136
Length = 841
Score = 777 bits (402), Expect = 0.0
Identities = 433/444 (97%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 1 actatgtagccaggcaaggcgtaaaccactctcaatagtcctcctgaattctggaattac 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 actatgtagccaggcaaggcgtaaaccactctcaataatcctcctgaattctggaattac 260
Query: 61 aatcatgagccattgcacacagatgtttttttctaaataactgagaattattttcataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcatgagccattgcacacagatgtttttttctaaataactgagaattattttcataca 320
Query: 121 gatgaacaaatattaatctccatcttaacgcactcttgatgatgtttttgtgtgtgcgtg 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 gatgaacaaatattaatctccatcttaacgcacccttgatgatgtttttgtgtgtgcgtg 380
Query: 181 tgcacacatgtgggcacatgtatggcagctgcaggacaacttgtgggacctggcttgatt 240
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tgcacacatgtgggcacgtgtatggcagctgcaggacaacttgagggacctggcttgatc 440
Query: 241 gtcctgtcttgtgagacccagggttcaggctcagaccgaatgtcatcactgtggcaagcc 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcctgtcatgtgagacccagggttcaggctcagaccgaatgtcatcactgtggcaagcc 500
Query: 301 ctcctgcttgctaggctgtctcacggggccctcaggcaaattttgacagatacattcaca 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcctgcttgctaagctgtctcacggggccctcaggcaaattttgacagatacattcaca 560
Query: 361 tggctgctcaccactcaacccaaatgagaagtcaccaccctccccaagctccctcagcct 420
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 tggctgctcgccactcaacccaaatgagaagtcaccacc-tccccaagctccctcagcct 619
Query: 421 ctgtactcctccaaccccccaccc 444
||||||||||||| |||||||||
Sbjct: 620 ctgtactcctcca--cccccaccc 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 841
Length adjustment: 10
Effective length of query: 434
Effective length of database: 831
Effective search space: 360654
Effective search space used: 360654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
