Query= MSMg01no132_a12.b1 MSMg01no132_a12.b1 CHROMAT_FILE:
MSMg01no132_a12.b1 PHD_FILE: MSMg01no132_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:26 2005
(636 letters)
>mm_chr7_86865803_86866837
Length = 1035
Score = 1141 bits (590), Expect = 0.0
Identities = 622/638 (97%), Gaps = 11/638 (1%)
Strand = Plus / Minus
Query: 1 cagcagaggcggagcgcaaagggtccggggcgcggcccgccagcccggagtccaccccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 cagcagaggcggagcgcaaagggtccggggcgcggcccgccagcccggagtccaccccgc 726
Query: 61 gcccgggccagccccgcggcagcttgcgcagcgtgcggggtctcagcgcgccctcctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gcccgggccagccccgcggcagcttgcgcagcgtgcggggtctcagcgcgccctcctgcc 666
Query: 121 ccggcctggacgacaaaaccgaggcgtcagcgcgtcccggcttcctggctatgcccagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccggcctggacgacaaaaccgaggcgtcagcgcgtcccggcttcctggctatgcccagag 606
Query: 181 agaagcctgcgcgcagagtcagcgacagcttcttccggcccagcgtcatggagcccatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agaagcctgcgcgcagagtcagcgacagcttcttccggcccagcgtcatggagcccatcc 546
Query: 241 tgggccgcgcgcagtacagccagctgcgcaagaagagctgagcagcctgcgtccctgctc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 545 tgggccgcgcgcagtacagccagctgcgcaagaagagctgagcagactgcgcccctgctc 486
Query: 301 gccccacgggaaggtcgcttctcttcaaagggcctttcctttagggtggcctgagccacg 360
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 485 gccccacgggaaggtcgcttctcgtcaa-gggcctttcctttagggtggcctgagccacg 427
Query: 361 accccacgatgctctcgaggcacacatcatgtctaaagcatcctttgggggcttgaccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 accccacgatgctctcgaggcacacatcatgtctaaagcatcctttgggggcttgaccat 367
Query: 421 cagaaccaatttttaaggggcaccagagccgcggtcgactctcctttctcgtgggcagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cagaaccaatttttaaggggcaccagagccgcggtcgactctcctttctcgtgggcagat 307
Query: 481 tctctcatggcttcttcttcctcttctttttttttttttttaaat--tataaaagcaatt 538
||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 306 tctctcatggcttcttcttcctcttcttttttt--------aaaaactataaaagcaatt 255
Query: 539 gcttgtttggatttctcacttctttaacaaaacttgttgccaagtgacacctgactagtt 598
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gattgtttggatttctcacttctttaacaaaacttgttgccaagtgacacctgactagtt 195
Query: 599 ctaaaattcccttctctgtggacatgaatttatgccat 636
||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ctaaaattcccttctctgtggacatgaatttatgccat 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1035
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1025
Effective search space: 641650
Effective search space used: 641650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_a12.g1 MSMg01no132_a12.g1 CHROMAT_FILE:
MSMg01no132_a12.g1 PHD_FILE: MSMg01no132_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:26 2005
(622 letters)
>mm_chr7_86769562_86770583
Length = 1022
Score = 1120 bits (579), Expect = 0.0
Identities = 604/621 (97%), Gaps = 14/621 (2%)
Strand = Plus / Plus
Query: 2 acatgctacagcctggatgaaccttgaagacactgctcagtgcaggaagctatgaagcag 61
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 216 acatgctacagcctggatgaaccttgaagacactgct--------------atgaagcag 261
Query: 62 gtcaagcacagtatggtgctactctaggagggaggtggagtcataggatgctcggagcca 121
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 262 gtcaagcacagtatggtgctaccctagaagggaggtggagtcataggatgctcggagcca 321
Query: 122 ggaagctgaagggtagttgccaggcgctggggaaggagaaggtagggagtggttgttttg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggaagctgaagggtagttgccaggcgctggggaaggagaaggtagggagtggttgttttg 381
Query: 182 ataaggcagagcctcagttttgcaagatcaaagagctctggagttggatggtggtagaga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ataaggcagagcctcagttttgcaagatcaaagagctctggagttggatggtggtagaga 441
Query: 242 aaagcaacgatggacattaactcagtcctgcctttgctgcctgtcagcctttgaatgggt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaagcaacgatggacattaactcagtcctgcctttgctgcctgtcagcctttgaatgggt 501
Query: 302 agaacgggcctggggagcacggctcccggaaagagactttgcctagtgtgttcaaggagg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agaacgggcctggggagcacggctcccggaaagagactttgcctagtgtgttcaaggagg 561
Query: 362 ccttggcttccatccccagccttgaaaaagaaaagcagattttatacattttaaataaag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccttggcttccatccccagccttgaaaaagaaaagcagattttatacattttaaataaag 621
Query: 422 ttgaagaaaaattatcccagttgaaaataaaagctacagttgggcgtgagtgtgtgggat 481
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 622 ttgaagaaaaattatcccagttgaaaataaaagctacagttgggtgtgagtgtgtgggat 681
Query: 482 gtacctttaatcccagcccttggaaggcagaagcaggtggatctctgagcggaaggccag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtacctttaatcccagcccttggaaggcagaagcaggtggatctctgagcggaaggccag 741
Query: 542 tttggtctacatagggagatccaggatagccagggctacagagaaagacaatcaattaat 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tttggtctacatagggagatccaggatagccagggctacagagaaagacaatcaattaat 801
Query: 602 caatcaatcaataatccccaa 622
|||||||||||||||||||||
Sbjct: 802 caatcaatcaataatccccaa 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
