Query= MSMg01no132_i12.b1 MSMg01no132_i12.b1 CHROMAT_FILE:
MSMg01no132_i12.b1 PHD_FILE: MSMg01no132_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:04 2005
(673 letters)
>mm_chr7_123501067_123502139
Length = 1073
Score = 928 bits (480), Expect = 0.0
Identities = 497/504 (98%), Gaps = 3/504 (0%)
Strand = Plus / Minus
Query: 170 tagagttattctttgttttttgtctcttggggtttgtgggggcgaggtgcatttggtttg 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 tagagttattctttgttttttgtctcttggggtttgtgggggcgaggtgcatttggtttg 1014
Query: 230 gttttgagacggggtctctatataaccctggctatcctagaacttgctatgtagaccaga 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gttttgagacggggtctctatataaccctggctatcctagaacttgctatgtagaccaga 954
Query: 290 ctggaattgaacttaagcagctatctccccatttccacctcctgagcgctgggattaaag 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 ctggaattgaacttaagcagctatctccccatttccacctcctgagcgctgggattaaag 894
Query: 350 gtgtgtgccaccatactaggcttcttcttgttttttgttttgtttttttaatgataattc 409
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 893 gtgtgtgccaccatactagg---cttcttgttttttgttttgtttttttaatgataattc 837
Query: 410 ctctgtattgcctggctgaaggccttgacttaagggattcttctcctggttgaacttctc 469
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 836 ctctgtattgcctggctgaaggcctagacttaagggattcttctcctggttgaacttctc 777
Query: 470 aaatacctatactatacaatggatttgcaccatgtgttcaactaggtcactgagggaaaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 aaatacctatactatacaatggatttgcaccatgtgttcaactaggtcactgagggaaaa 717
Query: 530 atggcagcttaaaaattcttttaaccaaatttattaaacatttatttgaaattgaagttg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atggcagcttaaaaattcttttaaccaaatttattaaacatttatttgaaattgaagttg 657
Query: 590 aatcagtaaaatttaaggtggtaacatacacttgtaatgcaatgctcaagaaagcgtatg 649
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 656 aatcagtaaaatttaaggtggtaacatacacttgtaatgcaatgctcaagaaagcgtagg 597
Query: 650 aaaggaatactgcaagttgtaggc 673
|||||| ||||||||||||||||
Sbjct: 596 aaaggaggactgcaagttgtaggc 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_i12.g1 MSMg01no132_i12.g1 CHROMAT_FILE:
MSMg01no132_i12.g1 PHD_FILE: MSMg01no132_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:04 2005
(625 letters)
>mm_chr7_123372794_123373818
Length = 1025
Score = 601 bits (311), Expect = e-176
Identities = 326/331 (98%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 295 aacaatagtgcaggatatctgatgtgctacccttgtcacaagggttgttcaacaaccttc 354
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 496 aacaatagtgcaggatatctgatgtgctacccttgtga-aagggttgttcaacaaccttc 554
Query: 355 ccaaagggttctccacccacaggttgagagccactgggctagaagtgtgagtttcaggcc 414
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 555 ccaaagggttctccacccacaggttgagaaccactgggctagaagtgtgagtttgaggcc 614
Query: 415 aacctgggccaaatactaagactctatctcaaaataatagtatcaataataaattttaaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aacctgggccaaatactaagactctatctcaaaataatagtatcaataataaattttaaa 674
Query: 475 aggtttaaattttactaaatttaattttttattcttacaaaaagacagtttactgcacac 534
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aggtctaaattttactaaatttaattttttattcttacaaaaagacagtttactgcacac 734
Query: 535 cttacttttctcataaacaagcctgacttcctctatggattaataaatgtatatagtata 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cttacttttctcataaacaagcctgacttcctctatggattaataaatgtatatagtata 794
Query: 595 gataaaggcccaccagtagaagagtaactaa 625
|||||||||||||||||||||||||||||||
Sbjct: 795 gataaaggcccaccagtagaagagtaactaa 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
