Query= MSMg01no132_o12.b1 MSMg01no132_o12.b1 CHROMAT_FILE:
MSMg01no132_o12.b1 PHD_FILE: MSMg01no132_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:34 2005
(689 letters)
>mm_chr7_78110009_78111099
Length = 1091
Score = 1261 bits (652), Expect = 0.0
Identities = 679/688 (98%), Gaps = 2/688 (0%)
Strand = Plus / Plus
Query: 4 gaattccatttttaatactcacatcatagacaccattggatggtgttgatggaagcaggt 63
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 gaattccatttttaatattcacatcatagacaccatcggatggtgttgatggaagcaggt 263
Query: 64 acaaatgttgtcagtagttcattagcagtgtgtggcttggctacattaatccaaagagga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acaaatgttgtcagtagttcattagcagtgtgtggcttggctacattaatccaaagagga 323
Query: 124 ataagtcctagaagggcagtcttcagacttcaaatgagtcccacagcacttttctactaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataagtcctagaagggcagtcttcagacttcaaatgagtcccacagcacttttctactaa 383
Query: 184 agttaagttgtgatttttt-catcctctctggagctcctgctttgagccagggatactgt 242
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 agttaagttgtgatttttttcatcctctctggagctcctgctttgagccaaggatactgt 443
Query: 243 tatgtgcctatccaacttctcctctatgatgcccagttctaccccttaaaaaaataccat 302
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatatgcctatccaacttctcctctatgatgcccagttctaccccttaaaaaaataccat 503
Query: 303 ttatctcctaaaaggaaaactgatatttatggtaagggttttgacatatgtgaatataat 362
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 504 ttatctcctaaaaggaaaactgatatttatggcaagggttttgacatatgtgaatataat 563
Query: 363 gcatatcagatgaagatcaatatggtatggaaagaacttacatggtatgaagggatacaa 422
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 564 gcatatcagatgaagatcaatatggtatggaaagaaccgacatggtatgaagggatacaa 623
Query: 423 tgttgatataaaagattaagtgtgcaggttgaaaatcaccactaaaaatagctcatgcag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgttgatataaaagattaagtgtgcaggttgaaaatcaccactaaaaatagctcatgcag 683
Query: 483 attttactaaattacccatcaacaaattagaa-atatttaagataacaaataattcaaaa 541
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 684 attttactaaattacccatcaacaaattagaacatatttaagataacaaataattcaaaa 743
Query: 542 ggagagagaaaatgtaaaacattaaagcaaatggggtaagagaccagaaaaggtagataa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggagagagaaaatgtaaaacattaaagcaaatggggtaagagaccagaaaaggtagataa 803
Query: 602 aaattcaaccattttaatgatttattgttaattgcttacacagaccaatttaagaataga 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaattcaaccattttaatgatttattgttaattgcttacacagaccaatttaagaataga 863
Query: 662 gcaaaagctaagtgtttgaaattaagca 689
||||||||||||||||||||||||||||
Sbjct: 864 gcaaaagctaagtgtttgaaattaagca 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1091
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1081
Effective search space: 733999
Effective search space used: 733999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_o12.g1 MSMg01no132_o12.g1 CHROMAT_FILE:
MSMg01no132_o12.g1 PHD_FILE: MSMg01no132_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:34 2005
(632 letters)
>mm_chr7_78262209_78263240
Length = 1032
Score = 578 bits (299), Expect = e-169
Identities = 348/369 (94%), Gaps = 9/369 (2%)
Strand = Plus / Minus
Query: 264 gaaaaaagggtgtggatttggatgacaggagagacgaggaggatctcggaggagctgagg 323
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1032 gaaaaaagggtgtggatttggatgacaggagagactaggaggatctcagaggagctgagg 973
Query: 324 gaggggaaagtaattagaatatattgtataaaaaatctattttccataaaaaaagagaaa 383
||||||||| ||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 972 gaggggaaactaattagaatatattgtat-aaaaatctattttccataa--------aaa 922
Query: 384 aagaaaaatatatttaatcttttaaaagataaaatgtaccacttgaaaattttttatttc 443
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 921 aagaaaaatatatttaatcttttaaaaaataaaatgtaccacttgaaaattttttatttc 862
Query: 444 attccttaattttaaattttttttataaagaaaagactagggatttatggagatattttt 503
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 attccttaatttaaaattttttttataaagaaaagactagggatttatggagatattttt 802
Query: 504 taaagatattttaatacaggtttaagcaggagagttaggagggaggaaagtgcttagaag 563
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaagatattttaatacaagtttaagcaggagagttaggagggaggaaagtgcttagaag 742
Query: 564 aaatgtagatgtacccaaatgtggttacgaaaacactggaactgttaaaacgatatttta 623
|||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||
Sbjct: 741 aaatgtagatgtacccaaatgtgggtacgagaccactggaacagttaaaacgatattttg 682
Query: 624 tcacataag 632
|||||||||
Sbjct: 681 tcacataag 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
