Query= MSMg01no133_b09.b1 MSMg01no133_b09.b1 CHROMAT_FILE:
MSMg01no133_b09.b1 PHD_FILE: MSMg01no133_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:48 2005
(631 letters)
>mm_chr7_107417975_107418999
Length = 1025
Score = 1110 bits (574), Expect = 0.0
Identities = 614/630 (97%), Gaps = 7/630 (1%)
Strand = Plus / Plus
Query: 1 gtttttacagaatgagtgattgtgtaacctttgggttgtgtattagtgttttgttgacgt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 gtttttacagaatgagtgattgtgtaacctttgggttgtatattagtgttttgttgacgt 260
Query: 61 ctacttatgtcactgttgcattttgcacgtggcaggtccatttatttcctcagtacctct 120
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 261 ctacttatgtcactgttgcatt--gcacgtggcaggtccattt----cctcagtacctct 314
Query: 121 caatgctcccacctctgtggtttatgctcaacagacacttacatgataagttcctacatt 180
||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||
Sbjct: 315 caatgctcccacctctgtggtatatgctcaacagacacttacatgataagctcttacatt 374
Query: 181 cattttattgtaattatgatgataactgttagcttaagttccatttgtaatgttcaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cattttattgtaattatgatgataactgttagcttaagttccatttgtaatgttcaaatg 434
Query: 241 ttgtttcagtactctaataatgtatttaatccatgtttgcatcttacccattttaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttgtttcagtactctaataatgtatttaatccatgtttgcatcttacccattttaaataa 494
Query: 301 ttttggtattctttgaaaattccatacatgtgtacaacatattttgatcttatccacccc 360
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 495 ttttggtattctttgaaaattccatacatgtatacgacatattttgatcttatccacccc 554
Query: 361 cggttcctcatcccaactctctctgggatccaccaacccatctccctcaagattttatgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 555 cggttcctcatcccaactctctctgggatccaccaacccatctccctcaagactttatgt 614
Query: 421 cctcttttttcatcttaaatttcaaaacatgtagtatgcttatattattatataacagat 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cctcttttttcat-ttaaatttcaaaacatgtagtatgcttatattattatataacagat 673
Query: 481 ttctttaaccttgataaattgaaattctgtactcattaaacaactttacacacccatctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttctttaaccttgataaattgaaattctgtactcattaaacaactttacacacccatctc 733
Query: 541 ccaactcttggcaatgaccaatccactttgcttctgtgacttagataccttagctacttc 600
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 734 ccaactcttggcaatgaccagtccacattgcttctgtgacttagataccttagctacttc 793
Query: 601 ctgcaactgtggtatattttatagttcttg 630
||||||||||||||||||||||||||||||
Sbjct: 794 ctgcaactgtggtatattttatagttcttg 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1025
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1015
Effective search space: 630315
Effective search space used: 630315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_b09.g1 MSMg01no133_b09.g1 CHROMAT_FILE:
MSMg01no133_b09.g1 PHD_FILE: MSMg01no133_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:48 2005
(231 letters)
>mm_chr7_107511786_107512416
Length = 631
Score = 447 bits (231), Expect = e-130
Identities = 231/231 (100%)
Strand = Plus / Minus
Query: 1 acttaaataagtaagtaaattaatcactattttgttgttaggagaataaagaaaatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acttaaataagtaagtaaattaatcactattttgttgttaggagaataaagaaaatattg 372
Query: 61 tgtatatacaaagcaccatcagtcatcagatgaactgttaagaaaaaagacctatcaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgtatatacaaagcaccatcagtcatcagatgaactgttaagaaaaaagacctatcaatt 312
Query: 121 aaattgtgacataatactttatcacttagagttcattttaaatttggatataaaaacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaattgtgacataatactttatcacttagagttcattttaaatttggatataaaaacttc 252
Query: 181 tcattattttatatgagctctgttggtgtgatcatatttcacttatgagtg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcattattttatatgagctctgttggtgtgatcatatttcacttatgagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
