Query= MSMg01no133_c24.b1 MSMg01no133_c24.b1 CHROMAT_FILE:
MSMg01no133_c24.b1 PHD_FILE: MSMg01no133_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:56 2005
(297 letters)
>mm_chr7_78245987_78246683
Length = 697
Score = 574 bits (297), Expect = e-168
Identities = 297/297 (100%)
Strand = Plus / Plus
Query: 1 tataataatcccacagagatttattcctccctacctgctcttccaaggttgagtgtttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tataataatcccacagagatttattcctccctacctgctcttccaaggttgagtgtttca 260
Query: 61 gcacattttaagatgaatcattgggagtagaatgactttgtgtgaagcagcaatggaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacattttaagatgaatcattgggagtagaatgactttgtgtgaagcagcaatggaagg 320
Query: 121 agtatttgtctacgaataccgaaaacactcaaatcacttagaagtgattttgataaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtatttgtctacgaataccgaaaacactcaaatcacttagaagtgattttgataaccaa 380
Query: 181 catgacagctggagtcatggaagataatttattttacccaaggacttctcttctaatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgacagctggagtcatggaagataatttattttacccaaggacttctcttctaatgca 440
Query: 241 taggttccatgtgagtattaagtctccaaagaaattaattcatgcctatcatttgag 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggttccatgtgagtattaagtctccaaagaaattaattcatgcctatcatttgag 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_c24.g1 MSMg01no133_c24.g1 CHROMAT_FILE:
MSMg01no133_c24.g1 PHD_FILE: MSMg01no133_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:56 2005
(656 letters)
>mm_chr7_78394627_78395680
Length = 1054
Score = 1226 bits (634), Expect = 0.0
Identities = 650/656 (99%), Gaps = 2/656 (0%)
Strand = Plus / Minus
Query: 1 cacttcaggataaagctaaggggaaaaaataggcactttctcccagtgtgttataattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 cacttcaggataaagctaaggggaaaaaataggcactttctcccagtgtgttataattac 795
Query: 61 aacacgttatttctgttaatgagcttctaggagaaagacatttggctcagtctcaagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 aacacgttatttctgttaatgagcttctaggagaaagacatttggctcagtctcaagaca 735
Query: 121 agcagactctgattgtaagaggccagagcttgcaaggtatccagagaaggctttatcagg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 agcagactctggttgtaagaggccagagcttgcaaggtatccagagaaggctttatcagg 675
Query: 181 tcacacaaccagatacacaaaagggtaatttctctctctctctgcattaaccctcaactg 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 674 tcacacaaccagatacacaaaagggtaatt--tctctctctctgcattaaccctcaactg 617
Query: 241 ggaatacctgtaggaaggtcccgcttttcacagacactccaggacaaggtgataagaaga 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 616 ggaatacctgtaggaaggtcccgctcttcacagacactccaggacaaggtgataagaaga 557
Query: 301 ttacaagtcaaacctctctttagctaatccacatctactgccagacagagcaagttaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttacaagtcaaacctctctttagctaatccacatctactgccagacagagcaagttaaat 497
Query: 361 tacagggctggccacaaatgcattgatcatccactcagcttgtactacccagagcctcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tacagggctggccacaaatgcattgatcatccactcagcttgtactacccagagcctcca 437
Query: 421 agatctatgcctaggatcagcaaaaatcatctcagctaagctcattttagtatggaggtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agatctatgcctaggatcagcaaaaatcatctcagctaagctcattttagtatggaggtc 377
Query: 481 taactcaattcagggaggtgaggtcggggcctggaccttactggccaatgttgaactcaa 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taacccaattcagggaggtgaggtcggggcctggaccttactggccaatgttgaactcaa 317
Query: 541 gtgatatatgatcttcatcaatgaagatttcagtccacaaaaggtgttgaaaggactgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtgatatatgatcttcatcaatgaagatttcagtccacaaaaggtgttgaaaggactgaa 257
Query: 601 cacacagatgacagagcccctgctctaataggactcatgtctgactccatcagctc 656
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 256 cacacagatgacagagcccctgctctaaaaggactcatgtctgactccatcagctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1054
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1044
Effective search space: 674424
Effective search space used: 674424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
