Query= MSMg01no134_c06.b1 MSMg01no134_c06.b1 CHROMAT_FILE:
MSMg01no134_c06.b1 PHD_FILE: MSMg01no134_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:15 2005
(683 letters)
>mm_chr7_71658732_71659813
Length = 1082
Score = 1274 bits (659), Expect = 0.0
Identities = 677/683 (99%), Gaps = 1/683 (0%)
Strand = Plus / Minus
Query: 1 caccataggctcatactcaggaaatggcaccgcttaccatccccacccagacccatgcta 60
|||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 882 caccataggctcatactcaggaaatggcactg-ttaccatccccacccagagccatgcta 824
Query: 61 tcaactgggtctaaggagcctggagaatccgggccagactaggaaaggccagggagaagg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 823 tcaactgggtctaaggagcctggagaacccgggccagactaggaaaggccagggagaagg 764
Query: 121 gtcatgagaacccatgacatgaggtcaagtcctggcacagcctctgctacctgcttctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gtcatgagaacccatgacatgaggtcaagtcctggcacagcctctgctacctgcttctgc 704
Query: 181 tatccctagaccttgaccctcatcttcttatctgttcttacatagagcaggattgattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tatccctagaccttgaccctcatcttcttatctgttcttacatagagcaggattgattca 644
Query: 241 gcaccggactctcatagccaagaagtagtagcaggtatgagggttaccacagccaactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 643 gcaccggactctcatagccaagaagtagtagcaggtatgagggttaccatagccaagtgt 584
Query: 301 gcacacacacacagaggcacctccatcccaaaaccttgggatgaccatgaacagcccact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gcacacacacacagaggcacctccatcccaaaaccttgggatgaccatgaacagcccact 524
Query: 361 gagctgtttcttcttcacaggaccttaaggaggaaacaaatgcatgcacgcgctgagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gagctgtttcttcttcacaggaccttaaggaggaaacaaatgcatgcacgcgctgagcct 464
Query: 421 ctcattgcagggtggacacacagaatactaaagccttcaacagcccactgtggactctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctcattgcagggtggacacacagaatactaaagccttcaacagcccactgtggactctac 404
Query: 481 aaaggtgtaaatgacccttggccatggtggtacacttgtcagccagctcgagcctatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aaaggtgtaaatgacccttggccatggtggtacacttgtcagccagctcgagcctatgaa 344
Query: 541 accaatgtggccaggactggcaagagtaccctctacagtcatggacctgtcatgggttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 accaatgtggccaggactggcaagagtaccctctacagtcatggacctgtcatgggttca 284
Query: 601 cagtcagtacatgggaaccaagcacagaacagggagggctaaagcagagtctagagcaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cagtcagtacatgggaaccaagcacagaacagggagggctaaagcagagtctagagcaat 224
Query: 661 gaggagctggatattgtttgggt 683
|||||||||||||||||||||||
Sbjct: 223 gaggagctggatattgtttgggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1082
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1072
Effective search space: 721456
Effective search space used: 721456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_c06.g1 MSMg01no134_c06.g1 CHROMAT_FILE:
MSMg01no134_c06.g1 PHD_FILE: MSMg01no134_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:15 2005
(676 letters)
>mm_chr7_71493601_71494677
Length = 1077
Score = 1237 bits (640), Expect = 0.0
Identities = 668/678 (98%), Gaps = 3/678 (0%)
Strand = Plus / Plus
Query: 1 tcagcagccaggcgcccgcacacaccactgaggacaggacccccgaggcaggagacaaga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagcagccaggcgcctgcacacaccactgaggacaggacccccgaggcaggagacaaga 260
Query: 61 tcctaagcatgatacaaaaggagagttagccaccttgaggacagaaacaccaagatgggc 120
||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctaagcacgatacaagagcagagttagccaccttgaggacagaaacaccaagatgggc 320
Query: 121 ttgagcggccatcagaggacaccagtacaattcaacaaacacgggccccaggaaccccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgagcggccatcagaggacaccagtacaattcaacaaacacgggccccaggaaccccag 380
Query: 181 aagtagctctgctgccggaccaggctccagagtggctagcagaagcccataggcaagctc 240
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 aagtagctctgctgcc-gaccaggctccagagaggctagcagaagcccataggcaagctc 439
Query: 241 tccgtggtcagttaccaacctctgcctggtgcgggcatcctgtggcacatctgatgaaga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 tccgtggtcagttaccaacctctgcctggtgcgggcatcctgtggcacatctgacgaaga 499
Query: 301 gggagtgtgactcagcactcaggagtgatgagaccttctacaattgccagagtgcagcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggagtgtgactcagcactcaggagtgatgagaccttctacaattgccagagtgcagcca 559
Query: 361 gcactgtgaagggatgactgaccacatcgcgggaaagtagtacctgagcttgctgtaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcactgtgaagggatgactgaccacatcgcgggaaagtagtacctgagcttgctgtaggg 619
Query: 421 aggtgaagcggtcccagctgaccagagaggccactctgccttgctgggcctgccatgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggtgaagcggtcccagctgaccagagaggccactctgccttgctgggcctgccatgctt 679
Query: 481 cgcccacccaggcccgcaggctctcagcaggggcgctgtggatcagctgcagcctggctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cgcccacccaggcccgcaggctctcagcaggggcgctgtggatcagctgcagcctggctt 739
Query: 541 ccagggcctgctccctgcttgcgaagaagctgtccgtgagcaaatccagtggggatgcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccagggcctgctccctgcttgcgaagaagctgtccgtgagcaaatccagtggggatgcct 799
Query: 601 gtgtggaagagaaagggaactttcctaacatgcctggggagggtgcttaaa--cagggga 658
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 800 gtgtggaagagaaagggaactttcctaacatgcctggggagggcgcttaaaaacagggga 859
Query: 659 tgctggagttccaggaga 676
||||||||||||||||||
Sbjct: 860 tgctggagttccaggaga 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1077
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1067
Effective search space: 710622
Effective search space used: 710622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
