Query= MSMg01no139_j02.b1 MSMg01no139_j02.b1 CHROMAT_FILE:
MSMg01no139_j02.b1 PHD_FILE: MSMg01no139_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:00 2005
(499 letters)
>mm_chr7_26642566_26643465
Length = 900
Score = 675 bits (349), Expect = 0.0
Identities = 376/385 (97%), Gaps = 1/385 (0%)
Strand = Plus / Minus
Query: 5 gaattcttccatttcagttcagggaaaagaatgatatagaaggcctgcttttattcaaat 64
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 386 gaattcttccatttcagttcagggaaaagaatgatatagaaggcctgcgtttattcaaat 327
Query: 65 tcctccagcagaaagaaacttaaacctggagtatgcagcgtaatctaaaaaggtgaggga 124
||||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 326 tcctcaagcaaaaagaaacttaaacctggagtgtgcagcacaatctaaaaaggtgaggga 267
Query: 125 tttgatctggcgtcatagtgattgcagg-ctatagaatcataggctccttgagggagggg 183
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 266 tttgatctggcgtcatagtgattgcaggcctatagaatcataggctccttgagggagggg 207
Query: 184 gtatgggtcagtggtcaagagcactggctgttgttccagaggtctcaggttcaattccca 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 206 gtatgggtcagtggtcaagagcactggctgttgttcctgaggtctcaggttcaattccca 147
Query: 244 acatcgtcatggtgactcacaattatctgtaactctgatgccgtcttctggtctctcagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 acatcgtcatggtgactcacaattatctgtaactctgatgccgtcttctggtctctcagg 87
Query: 304 caagtactcacattctaaataaataaatcttaaaggaaattagtttcctgggtttaaacc 363
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 86 caagtactcacattctaaataaataaatcttaaaggaagttagtttcctgggtttaaacc 27
Query: 364 tcaaaggtgtaacttttgacaggtt 388
|||||||||||||||||||||||||
Sbjct: 26 tcaaaggtgtaacttttgacaggtt 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 900
Length adjustment: 10
Effective length of query: 489
Effective length of database: 890
Effective search space: 435210
Effective search space used: 435210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_j02.g1 MSMg01no139_j02.g1 CHROMAT_FILE:
MSMg01no139_j02.g1 PHD_FILE: MSMg01no139_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:01 2005
(377 letters)
>mm_chr7_26491764_26492540
Length = 777
Score = 574 bits (297), Expect = e-168
Identities = 369/423 (87%), Gaps = 46/423 (10%)
Strand = Plus / Plus
Query: 1 tctcctgcttcctctttctcaagcccgtttcctcctttctcctgtgtttcacttccccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctgcttcctctttctcaagcccgtttcctcctttctcctgtgtttcacttccccta 260
Query: 61 ccctctgcctttctcaggcccccagggctcctaaacttgctttccactcagggagtgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctctgcctttctcaggcccccagggctcctaaacttgctttccactcagggagtgtct 320
Query: 121 gggagggagggagggagggaggcagggtgactgagggcagagttcctttggtttgaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggagggagggagggagggaggcagggtgactgagggcagagttcctttggtttgaggtt 380
Query: 181 gacagcactgagcctggaagagtgggtctgaggcctcctagcctcgtcccatcaggggct 240
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 381 gacagcactgagcctggaagagtgggtcagaggcctcctagtctcgtcccatcaggggct 440
Query: 241 gaaagcctctgaggaacaggttggggttgggggcaggacaagaagatttgt--------- 291
|| ||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 441 gagagcctctgaggaacaggttggggtttggggcaggacaagaacatttgtcattgccac 500
Query: 292 -------------------------------------gaacacaatcaggattgtagtca 314
|||||||||||||||||||||||
Sbjct: 501 tagctctggcctggcagatacacaaacacgcaagcaagaacacaatcaggattgtagtca 560
Query: 315 ctcaaggattgctgaatagccccactgcccccagcagaagccaaagaatggacagggtcc 374
||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 561 ttcaaggattgctgaatagccccactacccccagcagaagccaaagtatggacagggtcc 620
Query: 375 cac 377
|||
Sbjct: 621 cac 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
