Query= MSMg01no143_a02.b1 MSMg01no143_a02.b1 CHROMAT_FILE:
MSMg01no143_a02.b1 PHD_FILE: MSMg01no143_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:25 2005
(374 letters)
>mm_chr7_6383149_6383922
Length = 774
Score = 656 bits (339), Expect = 0.0
Identities = 363/371 (97%), Gaps = 2/371 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccagtaatcacttctgagatttgtgagagggaaatctcagatgatgagatgat 64
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcaccagtaatcaattctgagatttgtgagagggaaatctcagaagatgagatgat 264
Query: 65 gtttagaaagcagtttgaattattatatgccattactatgacaattctatcttggtagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttagaaagcagtttgaattattatatgccattactatgacaattctatcttggtagct 324
Query: 125 taggaatacttttttacttcttggattaattttgatgatttataataatcttttatcctc 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 taggaatacttttttacttcttggattcattttgatgatttataataatcttttatcctc 384
Query: 185 tagagagttcttcattctgtaggtcttttgagactataagcttaattatgaacactattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagagagttcttcattctgtaggtcttttgagactataagcttaattatgaacactattt 444
Query: 245 ttataattaaacaaaaaggttctctgtattttttcccatcactctttttctttgaactcg 304
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 445 ttataattaaacaaaaaggttctctgcattttttcccatcactcttttcctttgaactcg 504
Query: 305 ccattgtggcttccttgttatttatttgcttttaccaaacacttatctggc-tttggtta 363
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 505 ccgttgtggcttccttgttatttatttgcttttaccaaacacttatctggcgtttg-tta 563
Query: 364 ctgtctttcca 374
|||||||||||
Sbjct: 564 ctgtctttcca 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_a02.g1 MSMg01no143_a02.g1 CHROMAT_FILE:
MSMg01no143_a02.g1 PHD_FILE: MSMg01no143_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:25 2005
(371 letters)
>mm_chr7_6495526_6496296
Length = 771
Score = 607 bits (314), Expect = e-178
Identities = 355/384 (92%), Gaps = 25/384 (6%)
Strand = Plus / Minus
Query: 1 caggacagccagggctatacagagaaaccctgtctcaaaaaaaccaataaataaataaat 60
||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 624 caggacagccagggctatacagagaaaccctgtctcaaaaaaacc------------aat 577
Query: 61 aaataaataaataaataaataaataaataaataaataaataatctttttaaaaagatact 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 576 aaataaataaataaataaataaataaataaataaataaataatcttttaaaaaagatact 517
Query: 121 aaatgtcacttctggcttccatgaacacatgttcacctgcacccaaccacccacatgaag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 516 aaatgtcacttctggcttccatgaacacatgttcacctgcacccatccacccacatgaag 457
Query: 181 tgtgtgcacacagaaataagcgggaagcaaatctttccaacaagcctcgagaacaacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 456 tgtgtgcacacagaaataagcgggaagcaaatctttccaacaagcctcgagaacatcatg 397
Query: 241 ttaagagaaataagcaagacactaaaatttgatgcttctgtgaataagttttttagatat 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 396 ttaagagaaataagcaagacactaaaatttgatgtttctgtgaataagttttttagatat 337
Query: 301 gagattacagtaacaaagtatgatagagtggact-------------tgaaaaggtacaa 347
|||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 336 gagattacagtaacaaagtatgatagagtggactggagtgatgtctgtgaaaaggtacaa 277
Query: 348 gattttggttataaaatttttaaa 371
||||||||||||||||||||||||
Sbjct: 276 gattttggttataaaatttttaaa 253
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
