Query= MSMg01no143_m11.b1 MSMg01no143_m11.b1 CHROMAT_FILE:
MSMg01no143_m11.b1 PHD_FILE: MSMg01no143_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(494 letters)
>mm_chr7_143943974_143944867
Length = 894
Score = 551 bits (285), Expect = e-161
Identities = 333/353 (94%), Gaps = 11/353 (3%)
Strand = Plus / Minus
Query: 148 atattgttcaaacggcacagagaacaaattgtgaaaatcttgcaatacgtcagggaaacc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 atattgttcaaacggcacagagaacaaattgtgaaaatcttgcaatacgtcagggaaacc 835
Query: 208 agacaccccagaaagaatgtgcattttatatgaaattatttacatgac-attctgggaaa 266
||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||||||||
Sbjct: 834 agacaccacagaaagaatgtgtatttaatatgaaattatttacatg-ctattctgggaaa 776
Query: 267 gaaaagcccaccagaaggtagataagacgccttcaggaacaggttgtggg-gggcataaa 325
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 775 gaaaagcccaccataaggtagataagacgccttcaggaacaggttgtgggagggcataaa 716
Query: 326 caggcacggggaactttgggggcctgcggtaatgtagagattgacca----ccccctaca 381
|||||| ||||||||||||||||||||| ||||||||||||||| || |||||
Sbjct: 715 caggcaaggggaactttgggggcctgcgataatgtagagattgatcagggg----ctaca 660
Query: 382 tcaaattgtccaaacatgtctagcatctcagtgaggaaacagttacaccgttataaacct 441
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tcaaattgtacaaacatgtctagcatctcagtgaggaaacagttacaccgttataaacct 600
Query: 442 cattcttcagtagggctagaagtagagatggaatattaaaatcaactccatcc 494
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 599 cattcttcagtagggctagaagtagagatggagtattaaaatcaactccatcc 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_m11.g1 MSMg01no143_m11.g1 CHROMAT_FILE:
MSMg01no143_m11.g1 PHD_FILE: MSMg01no143_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(429 letters)
>mm_chr7_143821342_143822170
Length = 829
Score = 768 bits (397), Expect = 0.0
Identities = 421/433 (97%), Gaps = 8/433 (1%)
Strand = Plus / Plus
Query: 1 aattcctagccacaggttcagcttgatttgatctatccttgaagtctctttgtaggcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcctagccacaggttcagcttgatttgatctatccttgaagtctctttgtaggcatt 260
Query: 61 ccctctgaactctggacgccacactaggctgtactgagaaccaggcactactggtatgaa 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctctgaactctggatgccacactaggctgtactgagaaccaggcactactggtatgaa 320
Query: 121 gcaggatcctcccctttattcttgtttgctggagctttttgggaaatcgctaatgatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaggatcctcccctttattcttgtttgctggagctttttgggaaatcgctaatgatcag 380
Query: 181 agagttgaccctctgcttggcatgcctgacttccttcaatgttcaaaatcattctccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagttgaccctctgcttggcatgcctgacttccttcaatgttcaaaatcattctccatt 440
Query: 241 ggtgaatatgcaatttgtgcaagttgggaaaatagctgacacgaaggtaaggggtctggg 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 ggtgaatatgcaatttgtgcaagttggggaaatagctgacacgaaggtaaggggtctggg 500
Query: 301 gaggtggctcagtcagtaatgtacttgccttgcaagcttgagtacccgccccgg----gt 356
|||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct: 501 gaggtggctcagtcagtaatgtacttgccttgcaagcttgagtacctg----ggttgggt 556
Query: 357 ccccaaatgttgtggcatgtgtttgtaatcccagtaatggggagacagagacagatggat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccccaaatgttgtggcatgtgtttgtaatcccagtaatggggagacagagacagatggat 616
Query: 417 tcctggggtttgg 429
|||||||||||||
Sbjct: 617 tcctggggtttgg 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
