Query= MSMg01no145_k13.b1 MSMg01no145_k13.b1 CHROMAT_FILE:
MSMg01no145_k13.b1 PHD_FILE: MSMg01no145_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:48 2005
(614 letters)
>mm_chr7_63316979_63317992
Length = 1014
Score = 1141 bits (590), Expect = 0.0
Identities = 605/610 (99%)
Strand = Plus / Minus
Query: 5 gaattctttgtttagccctgagccccattttttaatggggttatctgattttctggagtc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gaattctttgtttagctctgagccccattttttaatggggttatctgattttctggagtc 674
Query: 65 cacgttcttcagttctttatatatattagatattagtcccctatctgatttagggaaatt 124
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 caccttcttcagttctttatatatattagatattagtcccctatctgatttagggaaatt 614
Query: 125 attattttcttaatgtttaacttcaaagagtttttgctattttgaaatttttaaaatata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 attattttcttaatgtttaacttcaaagagtttttgctattttgaaatttttaaaatata 554
Query: 185 cttaataaataaataatagacttagttcagttttaactgcggagatttataataatgctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cttaataaataaataatagacttagttcagttttaactgcggagatttataataatgctg 494
Query: 245 caatttaagccagtgtccctcagaggtcagttaaaggcttggtcctcagagagctactat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 caatttaagccagtgtccctcagaggtcagttaaaggcttggtcctcagagagctactat 434
Query: 305 aggagaaaaggcctatggtgattgttctggctcaacctgacccaggctaaagtcatgtga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aggagaaaaggcctatggtgattgttctggctcaacctgacccaggctaaagtcatgtga 374
Query: 365 gaaatgccacatcacaattgagaaaatacctccataacactgggctggaggcaggcattt 424
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaaatgggaaatcacaattgagaaaatacctccataacactgggctggaggcaggcattt 314
Query: 425 ccttaactagtgaatcatgggagagagtccagctcattgtaggtgatgatatctctggtc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccttaactagtgaatcatgggagagagtccagctcattgtaggtgatgatatctctggtc 254
Query: 485 ctgagcaggctgagcaagctatagggagccagccagttggcagcagtcttccatggcctc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctgagcaggctgagcaagctatagggagccagccagttggcagcagtcttccatggcctc 194
Query: 545 tacatcagttcctaccttcaggatcctatcatgctttagttcttgtcttaacttccttca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tacatcagttcctaccttcaggatcctatcatgctttagttcttgtcttaacttccttca 134
Query: 605 atgatgaaca 614
||||||||||
Sbjct: 133 atgatgaaca 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_k13.g1 MSMg01no145_k13.g1 CHROMAT_FILE:
MSMg01no145_k13.g1 PHD_FILE: MSMg01no145_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:49 2005
(639 letters)
>mm_chr7_63210451_63211489
Length = 1039
Score = 1189 bits (615), Expect = 0.0
Identities = 636/647 (98%), Gaps = 8/647 (1%)
Strand = Plus / Plus
Query: 1 tgcctacattgttgctaccagactctgcatgcctggttacttgtttataagcaagtaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgcctacattgttgctaccagactctgcatgcctggttacttgtttataagcaagtaacc 252
Query: 61 taagctctaagcaaattattggtcttttaagcccacagctttctggcagctcctacgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 taagctctaagcaaattattggtcttttaagcccacagctttctggcagctcctacgtat 312
Query: 121 gcttcatgttttctagatcaatacagatgaatagaatgagcatcaattgaccctaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gcttcatgttttctagatcaatacagatgaatagaatgagcatcaattgaccctaaaaaa 372
Query: 181 ttaaatctgcctattctagagtggccatttcatatgtaataaatagcttcatcatctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttaaatctgcctattctagagtggccatttcatatgtaataaatagcttcatcatctaga 432
Query: 241 tcagcattgtaatatggaaccaaattgccagagcagaactgtaaaatatcaaaatatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcagcattgtaatatggaaccaaattgccagagcagaactgtaaaatatcaaaatatgat 492
Query: 301 aggaagtaatatcactagatattgagtaaaatgcaatggcaacgctcacagcctaggaaa 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 493 aggaagtaatatcactagatattgagtaaaatgcaatggcaatgctcacagcctaggaaa 552
Query: 361 aggataaattaaaa-aaaaaaa-------aaactgtcaaccaggcagtggtagcacatac 412
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 553 aggataaattaaaacaaaaaaacaaaaaaaaactgtcaaccaggcagtggtagcacatac 612
Query: 413 ctttattttcaacacttgagaaacagatgcaggccaatctctgagttctaagccagcctg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctttattttcaacacttgagaaacagatgcaggccaatctctgagttctaagccagcctg 672
Query: 473 gtctccaaagtgagttccatgatagccaaggccacacagaaaaatcctatctcaaaaaac 532
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 673 gtctccaaagtgagttccatgatagccaaggccacacagaaaaatcctgtctcaaaaaac 732
Query: 533 caaaaccaaaccaaaccaaagaccaaaaccactaactatgcaaacactcctgtcttataa 592
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 733 caaaaccaaaccaaaccaaagaccaaaaccactaactatgcaaatactcctgtcttataa 792
Query: 593 caaggtagaagatgaagactcacaactgaggttgtcctctaatcttt 639
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 caaggtagaagatgaagactcacaactgaggttgtcctctaatcttt 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
