| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-146M08.T7 (MSMg01no146_m08.b1) | MSMg01-146M08.TJ (MSMg01no146_m08.g1) |
|---|
| ACC | AG350219 | AG350220 |
|---|
| length | 1,280 | 1,243 |
|---|
length of high quality
(start - end) | 536 (79 - 614) | 594 (86 - 679) |
|---|
| definition | CHROMAT_FILE: MSMg01no146_m08.b1 PHD_FILE: MSMg01no146_m08.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:08:56 2005 | CHROMAT_FILE: MSMg01no146_m08.g1 PHD_FILE: MSMg01no146_m08.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:08:56 2005 |
|---|
| singlet/doublet | --- | singlet |
|---|
| BLAST hit | no hit data | unique |
|---|
| sequence | TTGGGGGTCAGTGGGCGCTATAGACTCACTAAGGGAGAGGATCCGCGGAA
TTCTTTGTTCAGTTCTGACCCTTATTTTTTAATGGGGTTATTTGATTTTC
TGAAGTCCACCTTCTTGAGTTCTTTATACCCGCCTGGATATTAGTTCCCT
ATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTT
TTGTCCTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATT
AGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCT
GTTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGATTTTCCCCACTT
TCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATT
TATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCAT
TCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGC
TGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGA
TCATAGGTGTGTGGGTTCATTTCTGGTTCTTCAATTCTATTCTATTGGTC
TACTTGTTCTGTCTCTATCCCAGTATCTTTTTTTTTTTATCCCAATTGTT
TCTGTTATAAAGCTTTATGTTTTGTTATGCTGATTTTGTTAGAATTTCTT
TTATTCTTGATAATATTTTTTGCTATCCTATTTTTTTTTGTTATTTCCTA
TTTATTTCTTTTATTGTTCTTCTTTCTTTTTCTTCATTAATTGTTTTTTA
TTTTTTTATTTTTTTTCTTTTTATTTTTTTTTTCCTTTATTTTTTTATAT
ATTTTTTTTTTTCTTCCTTTTTTTTGTTTTTTTTTTTTTTTTTTTCATTT
CCTTTTTCTTTTTTTTACTTTTTTTTTTTTCTTTTTCTTCTTTTTTTTTT
TTCTTTTTCTTTTTTTTCTTTTTTTTTTTTTTCTTTCTTCCTTTCTTTTC
ATTTTATTTTTTTTCCTCTTTATTTTCCTATATTCTTTTTTCTATCTTCT
ATTTCTTTTTTATCTTTTTATATTTTTTTTCTTTATCTTTTTTCTTTATT
TTCTTCCGTCCCTTTTCCATTCCCTTTTCTGCTTCACTTATTCTTTCTTT
ATTTTTTCATCCTTTTCTTTCATTTCTTCCTTTTCTTTTTCTATTTCTTT
CTTTTNTTCTTTCAATTTTTCTTCTCTCTCCATTTTACTTTCTATTTATT
ATTTTTCTACTTCTCTTATTCTTTTCTTAT
| CTGTCTTTTNNNTAAGATGGTAGNCTGGGGCGCCXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTTTTTGTCTGTAACAGGATCAAC
TTCAACCTTTTACGTTCTTATTATCCAATTTAAAACCCCAATTAGTATCA
GTGATGAATACTGAAAACAGGATAGCCACAAAGTTTATGTCAGGTGAGGT
AAAGTAAAATCACTGCAATCATTGTTTCTGCAATGTCAATTTTGGACTTG
TAAGGGATTGTGTGAATTAAGGTTAATCCTATTAGACTGGAATAGAAATA
CATCTCTATACAACAGATTGGCTAGCACTTCATTTCAGACAAATAAAAAT
TTTAATTAGTAACAATAACAAAAATGAAAATAAAAAATACCCAATCTATA
AATAATTTAAATTAAAATAAAAAATACCTAATCTATAAAAACTGACTACA
ACAAAAGGCTATTATTATTAATATACCTATGAAACAGAGGAAAAGCCTTC
AACTCTGTATTTAAAGTGGACATTAACACACAGAATGGATTAGATTACAC
ACTTAAAACTAAAACTAATAAACATAAGCCAGACTTTAAAAAAATCTGGT
CTGTTGTAAAAGAGTGAACTCAAAATAATTTCAACTAGTGAACTTTTTTT
TTTTTGGTTTTGTTTATGGATTTTTGTTTGTTTTTTTATTTTTTTTTTTT
TATTTTATTTTTTTTTTTATTTTTATTTTTTTATTTTTTTTTTTTATTTT
TTATTTTTTTTTTTTATTTATATTTTTTTTTTTTTTTTTTTTTTTTTTTA
TTATATTTTTTTTTTTTTTTTTATCTTTTTTTTTTTTTTTTTTTTTTTTT
TTTATTTTTTTTTTATTTTTTTTTTATTTTTATATTTTATTTTCTTTTTT
TTTTTTTTTTTTATTTTTTTCTTTTTTTTTCTCTTTTTTTTTTTTTTTTT
TTATTTTTTTTTTTTTTTTCATCTTCTTTTTTATTTTCCTTTTTTTTCTC
TTTTTATTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTCTCATTTTCTC
TTTTCAATTTTTTTTTATATTTTCCTTTATTCTTTTTTTTTANTCTTTTT
TTTATTCTTCTTTTTCTTCTTTTTTTCTTTCACTTTATTCCTTACTTTTA
TCATATTTTCTTNTTACCTTTTATTATATATTACTATTCTTTTTTTCTTT
TATCCCTTTATTTTTATTCTCTCTTATATTCATTTTCTTTTTT
|
|---|
| quality values | Open.Hide. 6 6 6 6 6 7 6 6 6 3 3 9 9 10 14 15 12 11 8 12 8 8 8 12 12 17 24 15 13 8 8 8 19 21 37 33 33 33 36 42 42 42 42 50 48 50 50 43 43 43
43 53 53 53 53 53 50 36 36 31 31 31 31 37 37 28 34 28 19 20 16 16 15 16 16 23 28 22 19 23 21 33 30 39 48 48 38 38 42 42 53 53 57 57 57 57 53 53 53 53
53 53 57 47 47 42 42 25 15 15 14 22 22 31 32 39 39 39 36 33 33 33 37 37 34 28 16 12 8 9 8 8 8 10 10 14 19 26 35 37 37 33 33 33 36 53 53 53 53 53
53 53 53 53 53 57 53 53 53 50 50 50 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 54 54 48 50 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59
59 59 59 59 59 59 59 68 68 68 68 68 68 68 57 57 59 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 52 57 52 52 52 52 57 59 59 59
59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 57 59 57 68 68 68 68 68 68 68 57 59 59 59 59 59 59 68 68 68
68 68 48 46 37 37 30 42 42 48 57 59 59 54 54 54 59 59 59 59 59 59 59 47 47 39 37 35 59 59 59 59 59 59 59 59 59 59 48 48 47 59 59 30 30 19 11 10 9 10
9 9 11 21 24 31 31 47 59 59 59 59 59 59 59 59 59 33 33 30 32 28 37 23 28 32 39 39 43 43 48 57 57 57 57 48 48 48 48 32 32 17 19 23 30 21 41 41 47 57
48 54 54 59 59 42 37 35 28 32 26 18 18 32 34 57 57 57 59 59 59 59 59 59 59 59 47 35 35 42 35 35 35 42 42 57 57 59 59 57 57 47 57 43 43 43 43 43 43 43
47 47 54 59 59 59 48 48 43 43 43 43 41 32 20 20 20 32 41 33 30 30 25 34 12 11 11 20 15 28 24 39 37 59 47 47 43 39 39 35 30 28 28 28 30 30 23 23 12 9
9 11 18 12 11 11 22 24 37 43 30 27 12 11 11 12 23 25 35 32 32 22 23 21 27 13 18 18 20 28 40 41 28 25 28 29 29 41 29 32 24 23 19 19 27 23 13 13 13 15
26 18 23 31 31 31 31 22 22 19 21 12 12 12 19 15 21 11 11 11 11 11 9 8 8 8 11 9 10 16 15 19 18 19 10 10 10 10 10 10 11 11 11 18 23 21 23 17 14 14
11 13 14 9 9 11 11 10 8 8 10 9 23 23 22 21 11 11 11 18 13 10 10 7 6 8 8 8 8 8 8 8 10 10 10 8 11 9 9 9 9 9 9 12 16 22 14 12 8 10
10 8 8 9 10 10 10 10 9 13 13 10 12 11 11 15 9 9 9 10 15 9 12 12 19 10 8 8 11 7 9 10 10 18 18 15 13 10 10 10 10 10 10 8 11 6 6 8 8 8
8 10 8 9 10 17 15 9 9 8 10 10 9 9 19 19 18 18 12 12 10 10 10 13 8 8 7 10 8 8 8 8 8 8 8 7 6 8 8 8 10 8 8 8 11 12 10 8 8 7
7 13 12 12 14 17 15 15 15 21 19 28 14 13 14 10 10 10 14 8 8 8 8 8 8 10 11 12 9 8 8 8 8 8 10 8 15 8 10 9 10 13 16 18 17 11 8 8 9 8
10 10 12 17 15 19 19 17 23 10 11 8 8 8 8 10 9 14 16 20 20 29 17 16 8 8 8 14 13 18 28 16 16 10 10 10 13 13 16 14 14 12 13 11 10 10 11 11 13 9
9 9 9 9 10 10 10 19 11 16 10 10 9 9 8 8 9 9 9 12 16 16 16 12 10 10 15 10 8 8 6 6 8 8 10 8 8 8 8 13 13 14 12 10 8 10 10 10 14 13
13 10 10 8 8 11 15 12 10 10 8 8 11 10 16 15 10 9 9 10 13 14 18 10 10 8 8 8 10 10 10 11 11 8 11 9 9 8 8 8 8 8 8 8 8 8 15 13 8 8
8 8 10 10 8 6 6 10 15 15 13 8 8 8 10 11 7 7 8 12 12 9 8 10 13 13 10 14 12 15 10 12 9 8 8 8 10 10 13 12 8 8 8 8 10 10 12 8 8 8
8 8 8 11 16 12 18 18 10 8 8 6 6 6 6 8 8 8 6 7 10 8 8 8 8 8 11 11 6 10 9 6 12 6 8 8 8 10 12 15 11 10 6 6 8 10 11 10 10 10
13 8 9 8 8 8 6 8 8 10 10 7 6 8 8 10 8 9 9 12 10 8 8 7 6 12 12 10 8 8 8 6 6 8 8 8 12 12 13 14 10 10 8 9 10 9 11 6 6 8
8 12 12 22 10 10 8 8 8 8 11 8 8 15 13 12 10 8 11 8 11 8 8 10 10 10 10 12 8 8 8 15 15 10 8 8 10 12 12 9 9 9 9 9 11 10 10 10 15 8
6 6 8 8 3 0 3 10 10 10 8 8 8 8 8 8 18 12 13 12 8 8 8 10 7 6 6 6 8 10 10 9 9 10 15 8 8 8 8 12 8 8 9 12 13 15 16 16 9 9
9 9 9 8 9 8 8 8 8 6 6 10 10 10 10 8 8 6 7 6 6 8 6 12 12 22 15 12 11 11 | Open.Hide.10 10 10 10 10 9 11 11 3 0 0 0 3 6 6 9 10 8 6 6 6 6 3 0 3 6 6 6 6 9 11 13 9 7 9 8 11 9 16 19 20 24 28 31 31 31 31 35 24 24
28 28 35 32 37 37 37 37 35 35 35 36 38 53 53 50 50 50 50 42 41 27 27 11 9 11 11 12 16 16 16 14 10 14 15 19 24 23 33 36 47 53 53 53 57 57 57 53 53 53
50 50 50 57 53 53 57 57 47 47 47 42 26 26 10 10 9 10 10 23 23 36 36 36 36 36 33 33 33 37 37 41 39 35 22 19 11 12 12 12 11 15 18 22 30 41 48 50 53 50
57 57 57 57 57 59 57 57 53 53 53 53 57 57 59 57 53 68 68 68 68 68 68 68 68 68 68 57 57 57 57 54 57 48 53 53 68 68 68 57 57 57 57 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57
54 54 57 59 57 57 57 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 57 57 54 59 59 59 59 68 59 59 59 59 54 59 57 57 57 59 59 68 68 68 68 68 68 68
68 68 68 68 68 57 57 57 59 59 59 59 57 59 59 59 59 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 57 57 57 57 57 48 59 59 59 59 59 59 59 59
59 59 30 25 12 12 12 12 12 12 15 22 28 34 47 48 48 59 59 59 59 57 57 57 57 48 48 48 59 59 59 59 59 59 59 59 59 54 54 59 57 57 57 57 57 68 57 59 59 59
47 43 43 48 48 47 47 48 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 43 43 57 59 59
59 57 57 54 59 59 59 59 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 57 59 59 57 52 52 52
57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 59 59 68 68 68 68 68 59 59 59 57 57 50 50 37
37 43 50 44 59 59 59 57 57 57 57 59 59 59 59 48 48 48 59 59 59 57 57 57 59 59 68 68 59 59 59 47 43 43 44 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68
68 68 59 59 36 29 22 29 29 29 40 32 32 43 43 48 57 37 42 34 43 34 43 39 36 30 21 18 18 18 18 15 13 10 8 8 8 8 8 8 8 10 8 8 8 9 15 16 21 28
25 25 19 22 12 9 8 15 11 10 8 16 16 21 17 15 10 10 10 10 10 8 8 7 7 10 10 10 12 15 8 6 6 6 8 8 9 9 8 8 8 9 9 12 9 8 8 8 14 13
13 8 8 8 8 11 11 14 15 10 10 11 10 15 10 10 10 12 16 8 9 8 8 8 10 22 20 20 22 22 23 22 19 18 12 10 10 10 14 15 15 12 10 10 9 10 10 15 11 11
9 8 8 6 6 8 8 10 10 14 8 8 8 8 8 11 12 10 8 8 10 15 9 9 11 11 10 17 15 14 14 18 37 28 24 26 24 24 19 12 9 9 9 12 14 13 11 22 24 17
15 10 10 8 10 9 9 10 10 11 22 22 10 8 6 6 8 8 9 18 14 18 23 17 12 12 12 16 13 16 10 8 8 6 6 11 11 10 10 10 10 8 6 6 10 10 11 18 15 9
10 10 11 13 9 10 14 14 15 13 8 6 6 8 8 8 12 10 22 11 11 11 12 12 12 10 13 13 11 8 8 9 9 9 9 12 12 28 31 28 28 28 21 22 12 12 11 8 8 8
8 10 8 14 17 17 11 11 12 12 12 11 12 12 13 11 8 8 8 8 8 8 12 13 10 8 10 10 8 8 10 8 8 8 8 13 16 14 15 15 15 13 13 10 13 14 10 9 9 12
9 8 11 10 6 6 8 10 8 10 10 8 8 10 12 10 16 16 15 11 12 14 17 14 22 20 10 12 10 11 11 12 10 13 10 15 12 13 8 8 8 6 6 8 8 11 8 8 8 15
11 11 8 8 7 7 8 8 13 13 15 15 15 13 15 8 8 8 8 8 26 22 12 8 6 6 8 8 9 12 10 10 11 18 10 10 9 12 12 10 9 3 0 3 11 11 18 15 13 20
16 11 11 11 11 12 12 6 6 7 6 12 10 17 8 9 9 12 12 13 15 15 21 21 10 8 6 6 10 8 11 11 10 10 17 10 10 10 10 10 8 10 8 8 8 8 13 10 8 8
8 10 8 8 8 10 10 10 10 10 9 3 0 3 6 6 8 6 6 6 10 8 6 8 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 11 11 12 13 10 10 8 8 8 8 11
9 9 9 9 9 9 9 10 8 8 8 8 8 12 11 9 8 8 8 8 8 8 8 8 8 6 6 10 8 8 9 10 12 13 10 9 9 10 10 12 11 11 11 |
|---|
