Query= MSMg01no150_e08.b1 MSMg01no150_e08.b1 CHROMAT_FILE:
MSMg01no150_e08.b1 PHD_FILE: MSMg01no150_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:47 2005
(565 letters)
>mm_chr7_68734152_68735116
Length = 965
Score = 648 bits (335), Expect = 0.0
Identities = 362/371 (97%), Gaps = 1/371 (0%)
Strand = Plus / Minus
Query: 1 tttatttgttacagtttcaatatacccaggcaaataggtgtatcattttgaaacagactt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 370 tttatttgttacagtttcaatatacacaggcaaataggtgtatcattttgaaacagactt 311
Query: 61 acttaaataaactaagacctgagattatttctagtataaacatattaaaaccaggcatac 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 acttaaataaattaagacctgagattatttctagtataaacatattaaaaccaggcatac 251
Query: 121 tgacattagcattcaatcttatgacgggagggagagggaaaaaaggaagaacttttttaa 180
|| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
Sbjct: 250 tggcattagcattcaatcttatgacgggagggagaggggaaaaaggaagaaatttttt-a 192
Query: 181 aattaggtattcatttcatttacattttcaatgctatcccaaaagtcacacgcacgcttt 240
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 191 aattaggtatttatttcatttacattttcaatgctatcccaaaagtcacacacacgcttt 132
Query: 241 ccttacccactcccacttcttggcactggtgttcccctatactgaggcatataaagtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccttacccactcccacttcttggcactggtgttcccctatactgaggcatataaagtttg 72
Query: 301 caagaccaatgggcctctcattccactgatagcccactaggccatcttctgatacatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 caagaccaatgggcctctcattccactgatagcccactaggccatcttctgatacatatg 12
Query: 361 cagctagagac 371
|| ||||||||
Sbjct: 11 caactagagac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_e08.g1 MSMg01no150_e08.g1 CHROMAT_FILE:
MSMg01no150_e08.g1 PHD_FILE: MSMg01no150_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:47 2005
(283 letters)
>mm_chr7_68568521_68569203
Length = 683
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%)
Strand = Plus / Plus
Query: 1 ttattaagatgatattatttgtaaacattgaacttaatattcattcatatgtcatacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttattaagatgatattatttgtaaacattgaacttaatattcattcatatgtcatacatt 260
Query: 61 gtttcaaaaatacaaccattacatacgatgcgttagggttacccatgataaatataagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttcaaaaatacaaccattacatacgatgcgttagggttacccatgataaatataagtg 320
Query: 121 ataatccatggccatttaatttgttatccttttaatacacattcaaccaatttagtactg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatccatggccacttaatttgttatccttttaatacacattcaaccaatttagtactg 380
Query: 181 ttgatatgtgcttacaaacaggggactatcaagactgccctctgaaaaatccaataagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgatatgtgcttacaaacaggggactatcaagactgccctctgaaaaatccaataagca 440
Query: 241 cctgaatgtgtcttatgctcatatttacacttaaccaatgcac 283
|||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 441 cctgaatgtgtcagatgcttatatttacacttaaccaatgcac 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
