Query= MSMg01no151_c08.b1 MSMg01no151_c08.b1 CHROMAT_FILE:
MSMg01no151_c08.b1 PHD_FILE: MSMg01no151_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:53 2005
(319 letters)
>mm_chr7_5401931_5402649
Length = 719
Score = 416 bits (215), Expect = e-120
Identities = 291/327 (88%), Gaps = 23/327 (7%)
Strand = Plus / Plus
Query: 10 ttctacaaaaattctaagctaaagatcaataatagcattttgcagaagtcctaggtcaga 69
||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||
Sbjct: 197 ttctacaaaaattctaagctaaagatcaaca---gcattttgcaggagtcctagttcaga 253
Query: 70 cccatgctggctctttgaacgaattc--t---tg------------ccttgcttagttga 112
|||||||||||||| |||| |||||| | || ||||||||||||||
Sbjct: 254 cccatgctggctctgtgaatgaattcactctatgagtccctacacgccttgcttagttga 313
Query: 113 ttttatgggccatgttctcttggtgtccttgaccactctgattcctatagttcttcctcc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttttatgggccatgttctcttggtgtccttgaccactctgattcctatagttcttcctcc 373
Query: 173 ccctctttctcagggtttcccaaag-tccatctagtgtttgactatgtgtctctgcctct 231
||||||| |||||||||||| |||| |||||||| || ||| |||||||||||||| | |
Sbjct: 374 ccctcttcctcagggtttcc-aaagctccatctaatgcttggctatgtgtctctgc-tgt 431
Query: 232 gctaccagcaggtgctggagaaagactgtatgagcacagaatatcattaggaatgttttc 291
||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 432 gctaccagcaggtgctggagaaatactatgtgagcacagaatatcattaggaatgttttc 491
Query: 292 accatacttggatttttggttgcttgg 318
|||||||||||||||||||||||||||
Sbjct: 492 accatacttggatttttggttgcttgg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_c08.g1 MSMg01no151_c08.g1 CHROMAT_FILE:
MSMg01no151_c08.g1 PHD_FILE: MSMg01no151_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:53 2005
(153 letters)
>mm_chr7_5028051_5028603
Length = 553
Score = 275 bits (142), Expect = 1e-78
Identities = 148/150 (98%)
Strand = Plus / Plus
Query: 1 atggccttattgtagctaactaagcaagtgctttatccctgagccacttccataggccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 atggccttattgtagctaactaagcaagtgctttatccctgagccacttccatagaccca 260
Query: 61 agttctggttttagataggtgcctgtcctaggcagatggacagaagcagagaccttaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 agttctggttttagataggtgcctgtcctaggcagatggacagaagcagagactttaggt 320
Query: 121 aggattgctgtgtgtgtggttggggttagg 150
||||||||||||||||||||||||||||||
Sbjct: 321 aggattgctgtgtgtgtggttggggttagg 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
