Query= MSMg01no151_j23.b1 MSMg01no151_j23.b1 CHROMAT_FILE:
MSMg01no151_j23.b1 PHD_FILE: MSMg01no151_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:28 2005
(371 letters)
>mm_chr7_133121361_133122131
Length = 771
Score = 636 bits (329), Expect = 0.0
Identities = 359/369 (97%), Gaps = 2/369 (0%)
Strand = Plus / Minus
Query: 3 ggaattctgggagttccc-accctcacttagtaggtgaaggaatggagactcagagagat 61
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ggaattctgggag-gcccgaccctcacttagtaggtgaaggaatggagactcagagagat 574
Query: 62 gaatgtttcctcactcttgatcatggggcataatggttccagaatattctgtctgctacc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gaatgtttcctcactcttgatcatggggcataatggttccagaatattctgtctgctacc 514
Query: 122 gcaccatgtgcacactaatccccatagccaggccattcatattgtttcggggcattctgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 513 gcaccatgtgcacactaatccccatagccaggccattcatattgtttcggggcgttctgt 454
Query: 182 gggaatcaataatgcagctgtgacagcctttatattattaagatgcctccaagaattcat 241
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gggaatcaataatgcagttgtgacagcctttatattattaagatgcctccaagaattcat 394
Query: 242 tttggacgactctatgatatttcatagtgtctttctagacgtgtgtacgtggccgctaat 301
||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 393 tttggacgactctatgatatttcatagtgtcagccgagacgtgtgtacgcggccgctaat 334
Query: 302 tgcattgttatttatcatagcaaaaatggaatgtaattaagtgacacataaaaatgcccc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tgcattgttatttatcatagcaaaaatggaatgtaattaagtgacacataaaaatgcccc 274
Query: 362 gagatgata 370
|||||||||
Sbjct: 273 gagatgata 265
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_j23.g1 MSMg01no151_j23.g1 CHROMAT_FILE:
MSMg01no151_j23.g1 PHD_FILE: MSMg01no151_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:29 2005
(345 letters)
>mm_chr7_132995058_132995802
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Plus
Query: 1 ttgttccatgaggtcccaccaatgtggctctcagcttggtgaaatgtggaggctgagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ttgttccatgaggtcccaccaatgtggctctcagcttggtgaaatgtgggggctgagctc 260
Query: 61 ttgactcacatcaagaactcacatcagttgcttgagaccacatagtgtatgggacactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgactcacatcaagaactcacatcagttgcttgagaccacatagtgtatgggacactat 320
Query: 121 gacatgttatggatggcagatcactggggcctgaggccagctgaatcttctctcttcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacatgttatggatggcagatcactggggcctgaggccagctgaatcttctctcttcttg 380
Query: 181 gtgatgtgcccagcccctgagcactttggagacactattctcttcaccatggatgaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgatgtgcccagcccctgagcactttggagacactattctcttcaccatggatgaggac 440
Query: 241 atcctgtaggccatattctgtttggatgatacttttgacatggatgctgagagcctgtgt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcctggaggccatattctgtttggatgatacttttgacatggatgctgagagcctgtgt 500
Query: 301 ggccttcagcctgaagaagcgctaaggaggcccagcactgccgac 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggccttcagcctgaagaagcgctaaggaggcccagcactgccgac 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
