Query= MSMg01no151_k12.b1 MSMg01no151_k12.b1 CHROMAT_FILE:
MSMg01no151_k12.b1 PHD_FILE: MSMg01no151_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:31 2005
(321 letters)
>mm_chr7_121674713_121675431
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 316/321 (98%), Gaps = 2/321 (0%)
Strand = Plus / Plus
Query: 1 ctaatctgctctgacaacagtgataatggcattgtgtcccatggagaggaaaacattgag 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaatctgctctgacaac--tgataatggcattgtgtcccatggagaggaaaacattgag 258
Query: 61 gatcattgcttttctttcttgaaagaattatatgccgcatctttatttttggctaacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gatcattgcttttctttcttgaaagaattatatgccgcatctttatttttggctaacagg 318
Query: 121 aagtgctgatttctcaaagagcaaataaaaagtatactaaatgtgcccagctaataatga 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 319 aagtgctgatttctcaaagagcaaataaaaagtatactaaatgtgcccaactaataatga 378
Query: 181 taatttcacttgcttaaataatgctagttaatatttacatattagcctttattattgacc 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 taatttcacttgtttaaataatgctagttaatatttacatattagcctttattattgacc 438
Query: 241 aggcactgtttatttatctttatggatgtgtatgacaagattgccaccaattctttatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aggcactgtttatttatctttatggatgtgtatgacaagattgccaccaattctttatag 498
Query: 301 agaaataaatggacttgaaga 321
||||| |||||||||||||||
Sbjct: 499 agaaagaaatggacttgaaga 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 719
Length adjustment: 9
Effective length of query: 312
Effective length of database: 710
Effective search space: 221520
Effective search space used: 221520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_k12.g1 MSMg01no151_k12.g1 CHROMAT_FILE:
MSMg01no151_k12.g1 PHD_FILE: MSMg01no151_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:31 2005
(171 letters)
>mm_chr7_121814482_121815052
Length = 571
Score = 331 bits (171), Expect = 2e-95
Identities = 171/171 (100%)
Strand = Plus / Minus
Query: 1 agtattgtctcctcccttcccttgatttaagtcaggatgtctagagttagaaactgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agtattgtctcctcccttcccttgatttaagtcaggatgtctagagttagaaactgaggc 312
Query: 61 aggggggttataggtgtgctagctttacatcagcatcacaaaatacccaagtattgacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aggggggttataggtgtgctagctttacatcagcatcacaaaatacccaagtattgacca 252
Query: 121 agttatgaagaaagacttaccttcagctcccagtttcagaacttcagtctg 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agttatgaagaaagacttaccttcagctcccagtttcagaacttcagtctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
