Query= MSMg01no151_p20.b1 MSMg01no151_p20.b1 CHROMAT_FILE:
MSMg01no151_p20.b1 PHD_FILE: MSMg01no151_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:57 2005
(372 letters)
>mm_chr7_134933709_134934480
Length = 772
Score = 648 bits (335), Expect = 0.0
Identities = 356/369 (96%), Gaps = 11/369 (2%)
Strand = Plus / Minus
Query: 5 gaattctgggataaaccg-acatgccttgaaagtatgcctttaatcctagcactcaggag 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaattctgggataaacagtacatgccttgaaagtatgcctttaatcctagcactcaggag 613
Query: 64 gcagaggcaagtggacctatgtgatttgagatcatcctggtctacacagtaagtcccagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gcagaggcaagtggacctatgtgatttgagatcatcctggtctacacagtaagtcccagg 553
Query: 124 atatacaaggctacacagagagaccctgtcttgaaaaacaaaatttaaaaaaacaaaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atatacaaggctacacagagagaccctgtcttgaaaaacaaaatttaaaaaaacaaaaat 493
Query: 184 aaaggcaagtcctggtgatacacgtaaacccagaactctggaggtggagagaggagactg 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaaggcaagtcctggtgatacatgtaaacccagaactctggaggtggagagaggagactg 433
Query: 244 gccggagagcatgctcatctgtatatcaagttaggggcagcatgggctgtgtgagactct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gccggagagcatgctcatctgtatatcaagttaggggcagcatgggctgtgtgagactct 373
Query: 304 tcttgaaaaacaaaacaaaacaaaacaaaacaaggtgccagcaagatgactcagtaggca 363
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcttga----------aaaacaaaacaaaacaaggtgccagcaagatgactcagtaggca 323
Query: 364 cctgttgcc 372
|||||||||
Sbjct: 322 cctgttgcc 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_p20.g1 MSMg01no151_p20.g1 CHROMAT_FILE:
MSMg01no151_p20.g1 PHD_FILE: MSMg01no151_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:57 2005
(343 letters)
>mm_chr7_134856791_134857533
Length = 743
Score = 640 bits (331), Expect = 0.0
Identities = 340/343 (99%)
Strand = Plus / Plus
Query: 1 aaacaagagttggagaaatccaaagatatgtgaactttgaccttaaagagtttctggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacaagagttggagaaatccaaagatatgtgaactttgaccttaaagagtttctggata 260
Query: 61 gtatcggtgatgtagagtgaggagtctcaggatcagacagattcacacggataaaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatcggtgatgtagagtgaggagtctcaggatcagacagattcacacggataaaagaag 320
Query: 121 ctactttggaagtatgaacaaattccctaaagtggaaggaagaaattgatttgagaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctactttggaagtatgaacaaattccctaaagtggaaggaagaaattgatttgagaatag 380
Query: 181 ggagaacttggaggcagcactaagaaggaggtatttgaatttggtcctaatagtatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ggagaacttggaggcagcactaagaaggaggtatttgaatttggtcctagtagtatttca 440
Query: 241 atagtgacctgaggacaggagagacatctacgtagagaaactgcttggcggagatctggt 300
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 441 atagtgacctgaggacaggagagacatctatgtagagaaactgcttggtggagatctggt 500
Query: 301 gcctgggatggggcagattcttcgtaggttgaatattagcatc 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctgggatggggcagattcttcgtaggttgaatattagcatc 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
