Query= MSMg01no153_a04.b1 MSMg01no153_a04.b1 CHROMAT_FILE:
MSMg01no153_a04.b1 PHD_FILE: MSMg01no153_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:17 2005
(651 letters)
>mm_chr7_68350417_68351467
Length = 1051
Score = 1197 bits (619), Expect = 0.0
Identities = 640/647 (98%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 6 gaattctcttggaaaccccatcattgcaattgacattatcacaaaaattccctgagtgct 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctcttggaaaccccatcattgcaattgacattatcacaaaaattccctgagtgct 265
Query: 66 gttatacaaaattaattttcctagtgaaaacaataaatcat-gtctcacactgcactcaa 124
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 266 gttatacaaaattaattttcctagtgaaaacaataaat-attgtctcacactgcactcaa 324
Query: 125 tggcaaaataatttaaaatttcaacaaaatttgctctgaggaacaaatgaggcttttgtg 184
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 tggcaaactaatttaaaatttcaacaaaatttgctccgaggaacaaatgaggcttttgtg 384
Query: 185 cttatttcaaagcaaaagaaatgggctatttactgaatcattataactctaaaacaaaag 244
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 385 cttatttcaaagcaaaagaaatgggctatttactggatcattataactctaaaacaaaag 444
Query: 245 atgcatcagaacatatatccttggtagagagcatggctttttatagaaactgtctccact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgcatcagaacatatatccttggtagagagcatggctttttatagaaactgtctccact 504
Query: 305 ataatttccttacaaatatattctacaccacttggaaattatgttattttagagaaaact 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataatttccttacaaatatattctacaccacttggaaattatgttattttagagaaaacg 564
Query: 365 tgcatataacagttgagattattaggatgaactctcagaaaaccatgtgttaacactgag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgcatataacagttgagattattaggatgaactctcagaaaaccatgtgttaacactgag 624
Query: 425 tgttcttttctggggtcataaaataaatcaagaatccaagttttgatgatctttcataaa 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgttcttttctggggtcataaaataaatcaagaatccaagttttgatgatctttcataag 684
Query: 485 ctgacactgataaactccccaagatattactatattggcttcctctaaaggcttctctat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctgacactgataaactccccaagatattactatattggcttcctctaaaggcttctctat 744
Query: 545 gacagtcaattgcagaaatccctgggaaattataagaattatcagtttcaagaaagtggg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gacagtcaattgcagaaatccctgggaaattataagaattatcagtttcaagaaagtggg 804
Query: 605 tttttttgtttgtttgttttttgttttctccttgcacctatctattt 651
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttttttgtttgtttgttttttgttttctccttgcacctatctattt 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_a04.g1 MSMg01no153_a04.g1 CHROMAT_FILE:
MSMg01no153_a04.g1 PHD_FILE: MSMg01no153_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:17 2005
(619 letters)
>mm_chr7_68437515_68438533
Length = 1019
Score = 1174 bits (607), Expect = 0.0
Identities = 616/619 (99%)
Strand = Plus / Minus
Query: 1 atgctttccttgtggtagggtttgagacaacctactgaaatctagttgaatgagggagta 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 atgctttcctcgtggtagggtttgagacaacctactgaaatctagttgaatgagggagta 760
Query: 61 tattttgattggaaaatgcttacatgatagttcttcaaaatattcattaagattaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 759 tattttgattggaaaatgcttacatgatagttcttcaaaatattcatgaagattaaaaat 700
Query: 121 ggcattattattaaaatggtagtaaaatggcattattagtagaacactaattaatagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ggcattattattaaaatggtagtaaaatggcattattagtagaacactaattaatagaat 640
Query: 181 aactaatgtagagcaacagagcagaggatgtctacattctttttagtcttgatctttgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aactaatgtagagcaacagagcagaggatgtctacattctttttagtcttgatctttgtc 580
Query: 241 tttattgtttgtccttaaagatcaaatgcccagatttcataagactttaaagattttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tttattgtttgtccttaaagatcaaatgcccagatttcataagactttaaagattttact 520
Query: 301 tatggatgtataaaccacttctgagacacttctttgtcttgaaggatatcataatgactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tatggatgtataaaccacttctgagacacttctttgtcttgaaggatatcataatgactt 460
Query: 361 actgtgttttaaattgtgtccttttatttacatagatgaatctgtggtacttgaaacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 actgtgttttaaattgtgtccttttatttacatagatgaatctgtggtacttgaaacact 400
Query: 421 ggtgttcgggttattttcaccatgttttaataatcatggagagcctgaaataaagggaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggtgttcgggttattttcaccatgttttaataatcatggagagcctgaaataaagggaac 340
Query: 481 acttggtcagagtgttggatcatgtggaaaacaaatattatgaaatatctaaaaatattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 acttggtcagagtgttggatcatgtggaaaacaaatattatgaaatatctaaaaatattg 280
Query: 541 ctaaaagaatataattgctatgatacctattcagtgattagtaatcttaaaacatttaac 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 279 ctaaaagaatataattgctatgatacctattcagtgattagtaatcttaaaatatttaac 220
Query: 601 aaactggcactatactatc 619
|||||||||||||||||||
Sbjct: 219 aaactggcactatactatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
