Query= MSMg01no153_c21.b1 MSMg01no153_c21.b1 CHROMAT_FILE:
MSMg01no153_c21.b1 PHD_FILE: MSMg01no153_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:29 2005
(661 letters)
>mm_chr7_95636501_95637561
Length = 1061
Score = 1172 bits (606), Expect = 0.0
Identities = 642/654 (98%)
Strand = Plus / Minus
Query: 5 gaattcagtgaagatctccactaaacttttaaatcataatttatagaacctttataattt 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaattcagtgaagatctccagtaaacttttaaatcataatttatagaacctttataattt 799
Query: 65 acttctcgatagtccatgtcaaaaaatacaagggtttttgtcttgtcaaactattgatat 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 acttctagatagtccatgtcaaaaaatacaagggtttttgtcttgtcaaactattgatat 739
Query: 125 cactgcatctttttgtccaacctgaacaaaaaatatttatccctaacttcttgttttaca 184
|||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 738 cactgcatctttttgtccaacctgaacagaaattatttatccctaactttttgttttaca 679
Query: 185 aaatcattgttttattttaagaaacttgaatgaagttctagtacacagaatatacaaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatcattgttttattttaagaaacttgaatgaagttctagtacacagaatatacaaagg 619
Query: 245 gtgacgatgatcgccaaatgtatccatggccaatggtacaagctgacaagagatgttatc 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 618 gtgacgatgatcgccaaatgtatccatggccaatggtacaagctgacaatagatgttatc 559
Query: 305 atactctaagtccttcatacctgaccctgagtttacctactgtcaaagcacaagctgtca 364
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 558 atactctaagtccttcatacctgaccctgagtttacctgctgtcaaagcacaagctgtca 499
Query: 365 taccttgttattgattttattttctgggataatgctcaataatagtctctgagcctctgt 424
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 498 taccttgttattcattttattttctgggataatgctcaataatcgtctctgagcctctgt 439
Query: 425 tttgtcagctataaagtgctctttctaacaacacagaactaataaaaacttgtttccctt 484
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tttgtcagctataaagggctctttctaacaacacagaactaataaaaacttgtttccctt 379
Query: 485 gactgatcatgggtacatgtgctttatattcatatgccaaaacctttaggcgcatattct 544
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 378 gactgatcatgggtacatgtgctttatattcatatgccaaaacctttaggctcatattct 319
Query: 545 ttaattttacttagaattactgcaggttaaaaattaggtttcgttcttattggttctgtt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttaattttacttagaattactgcaggttaaaaattaggtttcgttcttattggttctgtt 259
Query: 605 gctactgttgaagtggaaggtgagtgatctcccttctgcagctcaaatgtctgt 658
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 258 gctactgttgaagtggaaggtgagtgacctcccttctgcagctcaaatgtctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_c21.g1 MSMg01no153_c21.g1 CHROMAT_FILE:
MSMg01no153_c21.g1 PHD_FILE: MSMg01no153_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:29 2005
(638 letters)
>mm_chr7_95465967_95467004
Length = 1038
Score = 1191 bits (616), Expect = 0.0
Identities = 634/640 (99%), Gaps = 2/640 (0%)
Strand = Plus / Plus
Query: 1 cactctttctca-tatgcagacactgaaggttgtcacagttgggagtggggagcatacat 59
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 200 cactctttctcaatatgcagacactgaaggttgtcacagttggaagtggggagcatacat 259
Query: 60 gctgctctcagtcagttgttagaggtgaggtacatgaacatgggacaatgagaggccatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gctgctctcagtcagttgttagaggtgaggtacatgaacatgggacaatgagaggccatt 319
Query: 120 ctttcacacaaagaattgtctaaagaaaaatcaacagtgcagtactgaaaagttatgtac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctttcacacaaagaattgtctaaagaaaaatcaacagtgcagtactgaaaagttatgtac 379
Query: 180 acaacctgctaacttcctttcactctttctcagcaccaaataattgttatgaactttgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acaacctgctaacttcctttcactctttctcagcaccaaataattgttatgaactttgga 439
Query: 240 atgggaggcttaaaggtatagtagaaatggctggaaatggcttagcagtaagtatattgt 299
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 atgggaggcttaaaggtatagtagaaatagctggaaatggcttagcagtaagtatattgt 499
Query: 300 ctgttcttcagaggacgagggttcaagtctctgcgcccacagttggtccacaacaagcca 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 ctgttcttcagaggacgagggttcaagtctctgcgcccacagttggtccacagcaagcca 559
Query: 360 tctataacttcattttcaggagatcagaatcgttgtctggcttctgtgggtatcaggcgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctataacttcattttcaggagatcagaatcgttgtctggcttctgtgggtatcaggcgt 619
Query: 420 gcttgtggtttatagacatacatgtaggtgaaacaccatctgtatataataataaaatac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcttgtggtttatagacatacatgtaggtgaaacaccatctgtatataataataaaatac 679
Query: 480 attttaaaattaaaaaaaaa-gttgtagcagaaacttccattgagagtaagaaactgaag 538
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attttaaaattaaaaaaaaaagttgtagcagaaacttccattgagagtaagaaactgaag 739
Query: 539 ctaagcttgaagcctaaaaggagtagcgaaatgcagacagtgacaaggagtaggtgaaag 598
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 740 ctaagcttgaagcctaaaaggagtagcgaaatgcagacagtgacaaggagtaagtgaaag 799
Query: 599 tacaagcaataagaaaagtagtaatgatgttctttcagat 638
||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tacaagcaataagaaaagtagtaatgatgttctttcagat 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
