Query= MSMg01no153_e23.b1 MSMg01no153_e23.b1 CHROMAT_FILE:
MSMg01no153_e23.b1 PHD_FILE: MSMg01no153_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:39 2005
(510 letters)
>mm_chr7_105264016_105264923
Length = 908
Score = 872 bits (451), Expect = 0.0
Identities = 491/505 (97%), Gaps = 2/505 (0%)
Strand = Plus / Minus
Query: 6 gaattcctggacccgaatacagtcctagaaacaagggtagcctcctcttgttcctcagct 65
||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 905 gaattcctggacccgaatagagtactagaaacaagggtagcctcctcttgctcctcagct 846
Query: 66 tccctgctgggaaccaggcccctgtgacttggggttgggtaccgagggatgcccagctaa 125
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 845 tccctgctgggaaccaggcccctgtgacttggggttgggtaccgagggttgcccagctaa 786
Query: 126 gagcaccatttggatgcaagagctgagctggaatcctggccttggctttccagctatgaa 185
||||||||||| |||||||||||| ||||||| ||||||||||||||||||| |||||||
Sbjct: 785 gagcaccatttagatgcaagagctaagctggactcctggccttggctttccatctatgaa 726
Query: 186 gctgtaggctaattgctgccatcactttgcaaagggctgatggtaggagggttgagagta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gctgtaggctaattgctgccatcactttgcaaagggctgatggtaggagggttgagagta 666
Query: 246 tcatgtcctgctaatagaactgtccagcctcggcttagcatagaagtccacagaggtcag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tcatgtcctgctaatagaactgtccagcctcggcttagcatagaagtccacagaggtcag 606
Query: 306 ctgccacataccttctgataacggtgctgtgccgtgttcccgtgcttttttttcctctta 365
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 605 ctgccacataccttctgataacggtgctgtgccgtgttcccgtgcttttttt--ctctta 548
Query: 366 ctttatttaagatgaggaaatcccaggagacctcagaggatccgatggtgctttttccat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctttatttaagatgaggaaatcccaggagacctcagaggatccgatggtgctttttccat 488
Query: 426 gtgcaggttgccctcccgtgggaatatgcatggcaggccattcattcagcttctctcctt 485
|||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 487 gtgcaggttgccctcccgtgggaatatgtattgcaggtcattcattcagtttctctcctt 428
Query: 486 ccttctgtacctcagccttcctgaa 510
|||||||||||||||||||||||||
Sbjct: 427 ccttctgtacctcagccttcctgaa 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 908
Length adjustment: 10
Effective length of query: 500
Effective length of database: 898
Effective search space: 449000
Effective search space used: 449000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_e23.g1 MSMg01no153_e23.g1 CHROMAT_FILE:
MSMg01no153_e23.g1 PHD_FILE: MSMg01no153_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:39 2005
(543 letters)
>mm_chr7_105135777_105136719
Length = 943
Score = 990 bits (512), Expect = 0.0
Identities = 536/544 (98%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 1 ttgtttctcttgcctaaccaacatttctggggatctttcttatatttctttttaaagtat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ttgtttctcttgcctaaccaacatttctgggggtctttcttatatttctttttaaagtat 260
Query: 61 atattcttacagtaataaaaatccatttcattgtatggatagtgaacagggtatatttag 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattcttacagtaataaaaacccatttcattgtatggatagtgaacagggtatatttag 320
Query: 121 caattagtgaagaacaggcaggactaacaaggctttctcaggagagctgtgagaaactaa 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caactagtgaagaacaggcaggactaacaaggctttctcaggagagctgtgagaaactaa 380
Query: 181 tctatgtgtagccaatgaaaggaaggtgagatcaggctgctgagttagacacaaattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctatgtgtagccaatgaaaggaaggtgagatcaggctgctgagttagacacaaattgag 440
Query: 241 taaatgtactaaatgacaaaactgagacccttggagttattgattcttctatttaaaaaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 taaatgtactaaatgacaaaactgagacccttggagttattgcttcttctatttaaaaaa 500
Query: 301 aaaa-gcaccattttgtcttattggacaaaattaactttcttattttctataaactaaca 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaagcaccattttgtcttattggacaaaattaactttcttattttctataaactaaca 560
Query: 360 tataactttatatagtccgggccctaatcagaagaagtaatgagtatctggttgtggtat 419
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 561 tataactttatatagtccgggccctaatcagaagaagtaatgagtagctggttgtggtgt 620
Query: 420 acatatataaccctagaaatcaggatcctggagtagaaggatcataaatttgaggctaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acatatataaccctagaaatcaggatcctggagtagaaggatcataaatttgaggctaat 680
Query: 480 ccaaccaacatagcaagactccatctaaagaaaaagaataatgtttttaaaaatgaggac 539
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccaaccaacatagcaagactctatctaaagaaaaagaataatgtttttaaaaatgaggac 740
Query: 540 ttgg 543
||||
Sbjct: 741 ttgg 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
