Query= MSMg01no154_o23.b1 MSMg01no154_o23.b1 CHROMAT_FILE:
MSMg01no154_o23.b1 PHD_FILE: MSMg01no154_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:42 2005
(576 letters)
>mm_chr7_61925222_61926201
Length = 980
Score = 988 bits (511), Expect = 0.0
Identities = 556/573 (97%), Gaps = 6/573 (1%)
Strand = Plus / Minus
Query: 9 gaattcttccacatacaccataaaatgcagatttcagttgtgtgttcacatgaagagcaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gaattcttccacatacaccataaaatgcagatttcagttgtgtgttcacatgaagagcaa 721
Query: 69 ggagcacaatagttctgagtaattgcatcgtaatgtttataataccagggaacataatag 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ggagcacaatagttctgagtaattgcatcgtaatgtttataataccagggaacataatag 661
Query: 129 ----gtaagtgttatatcgctgaaatttgaatgcttaaatttattatctgggtttattgt 184
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gtctgtaagtgttatatctctgaaatttgaatgcttaaatttattatctgggtttattgt 601
Query: 185 tttcttagtgtttcatcttagacaaaatataaatgttctcaatgcttttgtcttcttctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tttcttagtgtttcatcttagacaaaatataaatgttctcaatgcttttgtcttcttctt 541
Query: 245 tgtcaagtgagagatattaagacccattgttttaaacagttatgaaaattccaagagtat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgtcaagtgagagatattaagacccattgttttaaacagttatgaaaattccaagagtat 481
Query: 305 gccacgtaaaatgaacatcataggaaaatgtgctatgtgtgtcagatctttgtattat-a 363
||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| | |
Sbjct: 480 gccacataaaattaacatcataggaaaatgtgctgtgtgtgtcagatctttgtatt-tca 422
Query: 364 gtgtaaaatcccatttttattgattggcttgtggtgagttactcactaatttgttaaatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgtaaaatcccatttttattgattggcttgtggtgagttactcactaatttgttaaatg 362
Query: 424 agtaaaccttttcttccatacattagtatattgtgccttgcttaagagtttaaaaatacc 483
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 361 agtaagccttttcttccatacattagtatgttgtgccttgcttaagattttaaaaatacc 302
Query: 484 ttagattactaagtggcccattaacttaccaccaaaatatctagtttcacttgttgatat 543
|| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 tttgattactaaatgacccattaacttaccaccaaaatatctagttttacttgttgatat 242
Query: 544 ctgtaagtggactttgcttagttgcacttcact 576
|||||||||||||||||||||||||||||||||
Sbjct: 241 ctgtaagtggactttgcttagttgcacttcact 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 980
Length adjustment: 10
Effective length of query: 566
Effective length of database: 970
Effective search space: 549020
Effective search space used: 549020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_o23.g1 MSMg01no154_o23.g1 CHROMAT_FILE:
MSMg01no154_o23.g1 PHD_FILE: MSMg01no154_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:42 2005
(601 letters)
>mm_chr7_61792691_61793691
Length = 1001
Score = 1154 bits (597), Expect = 0.0
Identities = 600/601 (99%)
Strand = Plus / Plus
Query: 1 agtaacaggtacagttggagctaaaatattcttacataattatcttctcattgggagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaacaggtacagttggagctaaaatattcttacataattatcttctcattgggagaaa 260
Query: 61 ttagtcattcattaaatatggttattcccttagtagtttattaattgctaagtgaaaatt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattcattcattaaatatggttattcccttagtagtttattaattgctaagtgaaaatt 320
Query: 121 gtatggtttttaattacacaaattgtcctagaagaggagatatgctttaagcacagtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatggtttttaattacacaaattgtcctagaagaggagatatgctttaagcacagtaag 380
Query: 181 ttatgaatacttaaattactataccctttcaccatgataaaacaattaaaatttaaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatgaatacttaaattactataccctttcaccatgataaaacaattaaaatttaaatta 440
Query: 241 aagcacaatgaaatgagaatccagtctcatatgcataatgcaaactagccaaatgcaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcacaatgaaatgagaatccagtctcatatgcataatgcaaactagccaaatgcaatc 500
Query: 301 tatttgtaaataagagaggtaggattcattactgggctaatatgtagcaaaattaaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttgtaaataagagaggtaggattcattactgggctaatatgtagcaaaattaaattt 560
Query: 361 aaaaacctctatccaaaatacgaatataaaatacaaaaagaattgcccgattacttaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaacctctatccaaaatacgaatataaaatacaaaaagaattgcccgattacttaact 620
Query: 421 cactaaatttttctcaaatcatataactaatgtaaaaatgagtaattacatatatgtcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactaaatttttctcaaatcatataactaatgtaaaaatgagtaattacatatatgtcat 680
Query: 481 atgagggtaaaatcaagtaaatgtaaattacatgctaccttatgatcatttttaacaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgagggtaaaatcaagtaaatgtaaattacatgctaccttatgatcatttttaacaaga 740
Query: 541 gaaagattgtatgtaagttttcatgtaggaaaatgttatattattggacatttgcacaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaagattgtatgtaagttttcatgtaggaaaatgttatattattggacatttgcacaca 800
Query: 601 c 601
|
Sbjct: 801 c 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
