Query= MSMg01no155_d04.b1 MSMg01no155_d04.b1 CHROMAT_FILE:
MSMg01no155_d04.b1 PHD_FILE: MSMg01no155_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:03 2005
(420 letters)
>mm_chr7_112960642_112961461
Length = 820
Score = 714 bits (369), Expect = 0.0
Identities = 384/389 (98%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 5 gaattcattttaaataagccctaatatgatcatcattttgttaaatactagagctagact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaattcattttaaataagccctaatatgatcatcattttgttaaatactagagctagact 330
Query: 65 gtattttcacccaatttctcccagaaaactgttttcaaagagccataaggatgctgagca 124
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atattttcacccaattcctcccagaaaactgttttcaaagagccataaggatgctgagca 270
Query: 125 atggaagggaacatacacacacacaaacacacagaactttttttttaagaaaaagtattc 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atggaagggaacacacacacacacaaacacacagaactttttttttaagaaaaagtattc 210
Query: 185 atccacccagagacctagggaagaatcaaactgtagtgccgaaaataaat-aaaaaaatt 243
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 209 atccacccagagacctagggaagaaccaaactgtagtgccgaaaataaataaaaaaaatt 150
Query: 244 caatgagatggttcctagtgatattctgctagattcatagattggtgcctaactcagtcg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caatgagatggttcctagtgatattctgctagattcatagattggtgcctaactcagtcg 90
Query: 304 tcatcagagaggctgcctcttgcagctgatgggagatgtagaggcccactgacaaacatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tcatcagagaggctgcctcttgcagctgatgggagatgtagaggcccactgacaaacatt 30
Query: 364 aagaggagaaagaacctgggttggaggcc 392
|||||||||||||||||||||||||||||
Sbjct: 29 aagaggagaaagaacctgggttggaggcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_d04.g1 MSMg01no155_d04.g1 CHROMAT_FILE:
MSMg01no155_d04.g1 PHD_FILE: MSMg01no155_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:03 2005
(590 letters)
>mm_chr7_112854015_112855004
Length = 990
Score = 1120 bits (579), Expect = 0.0
Identities = 588/591 (99%), Gaps = 1/591 (0%)
Strand = Plus / Plus
Query: 1 tcatttcttttagagtcttcttctccttggtggatctctttaattcctgctgcctctcct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 200 tcatttcttttagagtcttcttctccttggtgaatctctttaattcctgctgcctctcct 259
Query: 61 gttagagcccagggcccaaagtttcccatgatgcagctcagactagattgacttttgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttagagcccagggcccaaagtttcccatgatgcagctcagactagattgacttttgtaa 319
Query: 121 cacagaaatctcaagtatctgcccttggatgcctttagtgtcgtgacttggtttggtatg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 cacagaaatctcaagtatctgcccttggatgcctttagtgtcgtgactcggtttggtatg 379
Query: 181 tccccaagatccttggatttcttatcctcttcagtggaactcatgacagccatctgtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tccccaagatccttggatttcttatcctcttcagtggaactcatgacagccatctgtcct 439
Query: 241 ccacccccatctctactttgttttgtatctttcttccaaaagaaaagagaaaaaagaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccacccccatctctactttgttttgtatctttcttccaaaagaaaagagaaaaaagaaaa 499
Query: 301 aacaaaagaaaaaaaaa-ggaggggaggcaaatgtataagactgtgccgaacaatgagaa 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacaaaagaaaaaaaaaaggaggggaggcaaatgtataagactgtgccgaacaatgagaa 559
Query: 360 aatgtagatgaatatggagataaagggacatatacactatagcaaagaaacagaatcgta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatgtagatgaatatggagataaagggacatatacactatagcaaagaaacagaatcgta 619
Query: 420 tttaaatggtgtgctacacatcaatgtcctgaatctttttagttagcctctgctgctagc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttaaatggtgtgctacacatcaatgtcctgaatctttttagttagcctctgctgctagc 679
Query: 480 tgtttcccaaaaccatctccttccctccatttctaatacttgcttcatttgctcatcagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtttcccaaaaccatctccttccctccatttctaatacttgcttcatttgctcatcagc 739
Query: 540 ttccctatttccacttgactgttaccccaaatacagttcctttctggccca 590
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttccctatttccacttgactgttaccccaaatacagttcctttctggccca 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
