Query= MSMg01no155_d20.b1 MSMg01no155_d20.b1 CHROMAT_FILE:
MSMg01no155_d20.b1 PHD_FILE: MSMg01no155_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:06 2005
(249 letters)
>mm_chr7_30754352_30755000
Length = 649
Score = 435 bits (225), Expect = e-126
Identities = 243/249 (97%)
Strand = Plus / Plus
Query: 1 cctaccacccagtccaggcagtcaccaagtcctataaatgccatcttctaagtatttctg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 cctaccacccagtccaggcagtcaccaagccctataaatgccatcttctaagtatttctg 260
Query: 61 gaatttatgttcttttctctgattttagtgttgattacaactatacagttttcatgggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatttatgttcttttctctgattttagtgttgattacaactatacagttttcatgggtt 320
Query: 121 ttctactgtctcctattactatcttcaaatctattttccataatatgcaaaaaattattt 180
|||||| |||| |||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 321 ttctaccgtctactattactatcttcaaatcttttttccgtaatatgcaaaaaattattt 380
Query: 181 ttactttgaggtgggatgttgtgtagtacaagctggccttagactcacatgtacaaaata 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttactttgacgtgggatgttgtgtagtacaagctggccttagactcacatgtacaaaata 440
Query: 241 gaaaaccca 249
|||||||||
Sbjct: 441 gaaaaccca 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no155_d20.g1 MSMg01no155_d20.g1 CHROMAT_FILE:
MSMg01no155_d20.g1 PHD_FILE: MSMg01no155_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:06 2005
(437 letters)
>mm_chr7_30819380_30820214
Length = 835
Score = 522 bits (270), Expect = e-152
Identities = 295/304 (97%), Gaps = 3/304 (0%)
Strand = Plus / Minus
Query: 1 caggccagttggggctccatgatgagagagcgagactaagtctcgaggtggaaagctgct 60
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 302 caggccagttggggctccatgatgagagagtgagact--gtctcgaggtggaaagctgct 245
Query: 61 gaggaagccatctgatgtcggcttcccatcccctcagctctacaagcgcacacgcgcaca 120
||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||
Sbjct: 244 gaggaagccatctgatgtcagcttcccatcccctcagctctacactcgcgcacgcgcaca 185
Query: 121 cgcgcagcacgcgcgcacgcgcaccaaacat-ggggggtgggaagctctgaaaagcagta 179
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 184 cgcgcagcacgcgcgcaggcgcaccaaacatgggggggtgggaagctctgaaaagcagta 125
Query: 180 tctagacaagcttcatgcttccaagccatgtcttttgtgatgggagtggcactgttagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tctagacaagcttcatgcttccaagccatgtcttttgtgatgggagtggcactgttagaa 65
Query: 240 ggtgtggccttgttggagtaggtgtgtcactgtgggtgtgggctttaagaccctcatcct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ggtgtggccttgttggagtaggtgtgtcactgtgggtgtgggctttaagaccctcatcct 5
Query: 300 agct 303
||||
Sbjct: 4 agct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 835
Length adjustment: 9
Effective length of query: 428
Effective length of database: 826
Effective search space: 353528
Effective search space used: 353528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
