Query= MSMg01no155_e04.b1 MSMg01no155_e04.b1 CHROMAT_FILE:
MSMg01no155_e04.b1 PHD_FILE: MSMg01no155_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:08 2005
(623 letters)
>mm_chr7_112960642_112961664
Length = 1023
Score = 698 bits (361), Expect = 0.0
Identities = 382/389 (98%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 5 gaattcattttaaattacccctaatatgatcatcattttgttaaatactagagctagact 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaattcattttaaataagccctaatatgatcatcattttgttaaatactagagctagact 330
Query: 65 gtattttcacccaatttctcccagaaaactgttttcaaagagccataaggatgctgagca 124
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atattttcacccaattcctcccagaaaactgttttcaaagagccataaggatgctgagca 270
Query: 125 atggaagggaacatacacacacacaaacacacagaactttttttttaagaaaaagtattc 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atggaagggaacacacacacacacaaacacacagaactttttttttaagaaaaagtattc 210
Query: 185 atccacccagagacctagggaagaatcaaactgtagtgccgaaaataaat-aaaaaaatt 243
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 209 atccacccagagacctagggaagaaccaaactgtagtgccgaaaataaataaaaaaaatt 150
Query: 244 caatgagatggttcctagtgatattctgctagattcatagattggtgcctaactcagtcg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caatgagatggttcctagtgatattctgctagattcatagattggtgcctaactcagtcg 90
Query: 304 tcatcagagaggctgcctcttgcagctgatgggagatgtagaggcccactgacaaacatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tcatcagagaggctgcctcttgcagctgatgggagatgtagaggcccactgacaaacatt 30
Query: 364 aagaggagaaagaacctgggttggaggcc 392
|||||||||||||||||||||||||||||
Sbjct: 29 aagaggagaaagaacctgggttggaggcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_e04.g1 MSMg01no155_e04.g1 CHROMAT_FILE:
MSMg01no155_e04.g1 PHD_FILE: MSMg01no155_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:08 2005
(567 letters)
>mm_chr7_112854015_112854981
Length = 967
Score = 1067 bits (552), Expect = 0.0
Identities = 564/568 (99%), Gaps = 1/568 (0%)
Strand = Plus / Plus
Query: 1 tcatttcttttagagtcttcttctccttggtggatctctttaattcctgctgcctctcct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 200 tcatttcttttagagtcttcttctccttggtgaatctctttaattcctgctgcctctcct 259
Query: 61 gttagagcccagggcccaaagtttcccatgatgcagctcagactagattgacttttgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttagagcccagggcccaaagtttcccatgatgcagctcagactagattgacttttgtaa 319
Query: 121 cacagaaatctcaagtatctgcccttggatgcctttagtgtcgtgacttggtttggtatg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 cacagaaatctcaagtatctgcccttggatgcctttagtgtcgtgactcggtttggtatg 379
Query: 181 tccccaagatccttggatttcttatcctcttcagtggaactcatgacagccatctgtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tccccaagatccttggatttcttatcctcttcagtggaactcatgacagccatctgtcct 439
Query: 241 ccacccccatctctactttgttttgtatctttcttccaaaagaaaagagaaaaaagaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccacccccatctctactttgttttgtatctttcttccaaaagaaaagagaaaaaagaaaa 499
Query: 301 aacaaaagaaaaaaaaa-ggaggggaggcaaatgtataagactgtgccgaacaatgagaa 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacaaaagaaaaaaaaaaggaggggaggcaaatgtataagactgtgccgaacaatgagaa 559
Query: 360 aatgtacatgaatatggagataaagggacatatacactatagcaaagaaacagaatcgta 419
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatgtagatgaatatggagataaagggacatatacactatagcaaagaaacagaatcgta 619
Query: 420 tttaaatggtgtgctacacatcaatgtcctgaatctttttagttagcctctgctgctagc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttaaatggtgtgctacacatcaatgtcctgaatctttttagttagcctctgctgctagc 679
Query: 480 tgtttcccaaaaccatctccttccctccatttctaatacttgcttcatttgctcatcagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtttcccaaaaccatctccttccctccatttctaatacttgcttcatttgctcatcagc 739
Query: 540 ttccctatttccacttgactgttacccc 567
||||||||||||||||||||||||||||
Sbjct: 740 ttccctatttccacttgactgttacccc 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
