Query= MSMg01no155_h04.b1 MSMg01no155_h04.b1 CHROMAT_FILE:
MSMg01no155_h04.b1 PHD_FILE: MSMg01no155_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:21 2005
(369 letters)
>mm_chr7_132643194_132643961
Length = 768
Score = 690 bits (357), Expect = 0.0
Identities = 366/369 (99%), Gaps = 1/369 (0%)
Strand = Plus / Plus
Query: 1 agatcaccccccaaggaggctctaacacggcttctcttatctacagttgcccttccatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatcaccccccaaggaggctctaacacggcttctcttatctacagttgcccttccatgc 260
Query: 61 atagtcagacagacggctacctgggggctgggagactacctagcccggaggctggagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagtcagacagacggctacctgggggctgggagactacctagcccggaggctggagtct 320
Query: 121 ccaccctatattacgatatctgcaaagaggtgcactgagacagtgtgatccacccgggtc 180
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 321 ccaccctatattacgatatctgc-aagaggcgcactgagacagtgtgatccacccgggtc 379
Query: 181 ctgtgttaacgccttcacgccgtgccttatgctcactctcttcttgtgcttagtctctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgtgttaacgccttcacgccgtgccttatgctcactctcttcttgtgcttagtctctca 439
Query: 241 tgggggatgatctcattgcttttagaatgaacagaagtgaggaggagtgggctcctcccc 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgggagatgatctcattgcttttagaatgaacagaagtgaggaggagtgggctcctcccc 499
Query: 301 aacactcctcagtctacagcagcctccaggggcccttttgtctgacttgaagttgattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacactcctcagtctacagcagcctccaggggcccttttgtctgacttgaagttgattca 559
Query: 361 ctcctctgg 369
|||||||||
Sbjct: 560 ctcctctgg 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 768
Length adjustment: 9
Effective length of query: 360
Effective length of database: 759
Effective search space: 273240
Effective search space used: 273240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_h04.g1 MSMg01no155_h04.g1 CHROMAT_FILE:
MSMg01no155_h04.g1 PHD_FILE: MSMg01no155_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:21 2005
(404 letters)
>mm_chr7_132824124_132824929
Length = 806
Score = 743 bits (384), Expect = 0.0
Identities = 400/406 (98%), Gaps = 2/406 (0%)
Strand = Plus / Minus
Query: 1 gaaagatggaagacgaccatgatgatgatgacgatgaggaggtcatctccaagggagtcc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaaagatggaagacgaccacgatgatgatgacgatgaggaggtcatctccaagggagtcc 547
Query: 61 ctcctgtggacatcgtctttgagcgggacatgctcacgcagacctacgagctcagtgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctcctgtggacatcgtctttgagcgggacatgctcacgcagacctacgagctcagtgagt 487
Query: 121 cccgctcacagcccttgcctgaggctatgagccctagagtgggaaaggtgtccccgtgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cccgctcacagcccttgcctgaggctatgagccctagagtgggaaaggtgtccccgtgag 427
Query: 181 gggagtggggctccagcgcataaagcctaggaggtggcaggcttctctccaggtttcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 426 gggagtggggctccagcgcataaagcctaggaggtggcaggcttctctccaggcttcggc 367
Query: 241 tgtggatcaagttcagggtggagccttgttgcctcctagatatgtggctttaacaagatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgtggatcaagttcagggtggagccttgttgcctcctagatatgtggctttaacaagatc 307
Query: 301 cttgagccttgcttccctgtctgtgaaaatggggaatgacaacagaattctc--tagagg 358
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 306 cttgagccttgcttccctgtctgtgaaaatggggaatgacaacagaattctctatagagg 247
Query: 359 tgcaccagtagactgagggcatttattagggagattgtttcatgtg 404
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tgcatcagtagactgagggcatttattagggagattgtttcatgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 806
Length adjustment: 9
Effective length of query: 395
Effective length of database: 797
Effective search space: 314815
Effective search space used: 314815
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
