Query= MSMg01no155_k16.b1 MSMg01no155_k16.b1 CHROMAT_FILE:
MSMg01no155_k16.b1 PHD_FILE: MSMg01no155_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:37 2005
(361 letters)
>mm_chr7_18884038_18884798
Length = 761
Score = 640 bits (331), Expect = 0.0
Identities = 334/335 (99%)
Strand = Plus / Minus
Query: 5 gaattccacagttgtctgctacatcctaagtcacagagtgtcctatcctctctgtctgag 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaattccacagttgtgtgctacatcctaagtcacagagtgtcctatcctctctgtctgag 276
Query: 65 tcaatgtcttaaggaagaagaagataaagaaagagaagcagcagttggtgcagaactgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcaatgtcttaaggaagaagaagataaagaaagagaagcagcagttggtgcagaactgaa 216
Query: 125 ggagactgaaggaaggggcagagtcaggcagatcctgagagatcctggcttgccttccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggagactgaaggaaggggcagagtcaggcagatcctgagagatcctggcttgccttccca 156
Query: 185 gagaaagaggtgagcatctggttcaggatgagactttgtctcaaagattaaggtggtgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gagaaagaggtgagcatctggttcaggatgagactttgtctcaaagattaaggtggtgaa 96
Query: 245 tgataggagaagacaccttatatccttttctggttttcatatatgcatactggggtgcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tgataggagaagacaccttatatccttttctggttttcatatatgcatactggggtgcat 36
Query: 305 gcacttatacaccaatatacaggcaacaccacaca 339
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gcacttatacaccaatatacaggcaacaccacaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_k16.g1 MSMg01no155_k16.g1 CHROMAT_FILE:
MSMg01no155_k16.g1 PHD_FILE: MSMg01no155_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:37 2005
(420 letters)
>mm_chr7_18763302_18764122
Length = 821
Score = 745 bits (385), Expect = 0.0
Identities = 412/421 (97%), Gaps = 1/421 (0%)
Strand = Plus / Plus
Query: 1 actgtctgactgagaaaactatcaagcctcaggcaaattgtcctgccatggaaaaatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtctgactgagaaaactatcaagcctcaggcaaattgtcctgccatggaaaaatcaa 260
Query: 61 acgctatgactattgatgtccttatgttcttaaactttctgtaaatccttatgagtcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgctatgactattgatgtccttatgttcttaaactttctgtaaatccttatgagtcatt 320
Query: 121 gaggggggg-tggatcctgacacctcggagcacaggagaagcctcacagctcctggtaag 179
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggggggggtggatcctgacacctcggagcacaggagaagcctcacagctcctggtaag 380
Query: 180 aatgggtccagtaaatcatgaacatcaattagcttaccaaagtgcctctaattcagttcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgggtccagtaaatcatgaacatcaattagcttaccaaagtgcctctaattcagttcc 440
Query: 240 aggttcaataaaactctactctggggcttttaagtgtggctctggggctaaagagatagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggttcaataaaactctactctggggcttttaagtgtggctctggggctaaagagatagt 500
Query: 300 tcagtgtgcaaaatgtttgctgttcaagtatgagtgcctaacccaaatactcagaatcta 359
|||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 501 tcagtgcgtaaaatgtttgctgttcaagtatgagtgcctaagttaaatactcagaaccta 560
Query: 360 tataaagccagaactgtagtctactctcaggactcccatgaaagacttggatcatctttg 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 tataaagccagaactgtagtctactcccaggactcccatgaaagacttggatcatctttg 620
Query: 420 a 420
|
Sbjct: 621 a 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 821
Length adjustment: 9
Effective length of query: 411
Effective length of database: 812
Effective search space: 333732
Effective search space used: 333732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
