Query= MSMg01no155_l10.b1 MSMg01no155_l10.b1 CHROMAT_FILE:
MSMg01no155_l10.b1 PHD_FILE: MSMg01no155_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:40 2005
(451 letters)
>mm_chr7_131933511_131934361
Length = 851
Score = 712 bits (368), Expect = 0.0
Identities = 383/388 (98%)
Strand = Plus / Minus
Query: 1 gtggcttctagtcattgctggcttccttgtccacctgtgtcttttatgggacacagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 388 gtggcttctagtcattgctggcttccttgtccacctgtgtcttttatgggagacagagct 329
Query: 61 gctaaattacaggcttcacagctggttatctgtagtttggatcagaactctgctggtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gctaaattacaggcttcacagctggttatctgtagtttggatcagaactctgctggtatt 269
Query: 121 aattaaattgtctgtgggtagagtaagaaaactacaactttaagaggttttaacccataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aattaaattgtctgtgggtagagtaagaaaactacaactttaagaggttttaacccataa 209
Query: 181 aagcatggttcttgtttcttttttattactagagacagaatactgggtcttatgcttgct 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aagcatggttcttgtttcttatttattactagagacagaatactgggtcttatgcttgct 149
Query: 241 atgtagacactctgcctcagaactacatccccagccccatatttcatgcttcttttgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atgtagacactctgcctcagaactacatccccagccccatatttcatgcttcttttgtgc 89
Query: 301 atccacgaagcacccattggaggccttgagttgtgttccttggcaggctgttgatgtcat 360
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 88 atccacgaagcacccattggaggccttgagttgtgttcctttgcaggttgttgatgtcat 29
Query: 361 tatcatctgtaaaagtaaaaaaaaaaaa 388
||||||||||||||||||||||||||||
Sbjct: 28 tatcatctgtaaaagtaaaaaaaaaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_l10.g1 MSMg01no155_l10.g1 CHROMAT_FILE:
MSMg01no155_l10.g1 PHD_FILE: MSMg01no155_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:40 2005
(503 letters)
>mm_chr7_131789639_131790541
Length = 903
Score = 872 bits (451), Expect = 0.0
Identities = 482/503 (95%), Gaps = 19/503 (3%)
Strand = Plus / Plus
Query: 1 gtggcatcacagttgaccatagcaactgactcagtgttgagatatcagccatcaatacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtggcatcacagttgaccatagcaactgactcagtgttgagatatcagccatcaatacat 260
Query: 61 gaatcagacaggctgagaggaagaggagagaagaggctgaacagaggtcccagctgttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatcagacaggctgagaggaagaggagagaagaggctgaacagaggtcccagctgttga 320
Query: 121 gtgacaagtgacagaagaaagaaagaatgtgatagagagctgggaggcagctctgtggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgacaagtgacagaagaaagaaagaatgtgatagagagctgggaggcagctctgtggat 380
Query: 181 aaagcacttgctgtgttaggctaaagactaaaaggtttggatccccaccatccacataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagcacttgctgtgttaggctaaagactaaaaggtttggatccccaccatccacataag 440
Query: 241 agttggcagatttgacacctcacctataatcccaacactcagacaggtcatccctgggac 300
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtt--------tgacacctcacctataatcccaacactcagacaggtcatccctgggac 492
Query: 301 aggtcatccctagttagctagactagttggatttggggagctcttagttcagtcaaagac 360
| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aag------ctagttagctagactagttggatttggggagctcttagttcagtcaaagac 546
Query: 361 cctgccttcataaatgaagaagagagtaatagagaaagataccaaatattaggcttactc 420
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 547 ccttccttcataaatgaaga-----gtaatagagaaagataccaaatattaggcttactc 601
Query: 421 ctacacacacatacaggcacacacatgtgcccactcaccagtgtgtctatgcccattcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctacacacacatacaggcacacacatgtgcccactcaccagtgtgtctatgcccattcaa 661
Query: 481 acacacatatctgtggggacacc 503
|||||||||||||||||||||||
Sbjct: 662 acacacatatctgtggggacacc 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
