Query= MSMg01no158_g18.b1 MSMg01no158_g18.b1 CHROMAT_FILE:
MSMg01no158_g18.b1 PHD_FILE: MSMg01no158_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:57 2005
(306 letters)
>mm_chr7_50857103_50857808
Length = 706
Score = 578 bits (299), Expect = e-169
Identities = 302/303 (99%)
Strand = Plus / Plus
Query: 4 ggaattccacaaaagcacaccatgcaacaaacctcgcacaagagatttattggggagaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacaaaagcacaccatgcaacaaacctcgcacaagagatttattggggagaaa 263
Query: 64 cccagaatgggagctgcctctgaatgaaaagaaacgtcaggatctttgaagcagtgagct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccagaatgggagctgcctctgaatgaaaagaaacgtcaggatctttgaagcagtgagct 323
Query: 124 cattgaaaagcacagtgcttatctgttaatcctgaaatattgcttggccattatcgctta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cattgaaaagcacagtgcttatctgttaatcctgaaatattgcttggccattatcgctta 383
Query: 184 gtcatgggggttgggatttctaagtcttggagttcagggtcaagccacaagcagggggat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtcatgggggttgggatttctaagtcttggagttcagggtcaagccacaagcagggggat 443
Query: 244 tttccactggccatttcaccctacattctttcctttttgtttactattgataactaatca 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 tttccactggccatttcaccctacattctttccttttcgtttactattgataactaatca 503
Query: 304 ggg 306
|||
Sbjct: 504 ggg 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_g18.g1 MSMg01no158_g18.g1 CHROMAT_FILE:
MSMg01no158_g18.g1 PHD_FILE: MSMg01no158_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:57 2005
(290 letters)
>mm_chr7_51022057_51022743
Length = 687
Score = 528 bits (273), Expect = e-154
Identities = 281/285 (98%), Gaps = 3/285 (1%)
Strand = Plus / Minus
Query: 1 ctgtttctgaactgtgtgcgatacctgtgctaatgaattagcctgggtattaatctatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgtttctgaactgtgtgcgatacctgtgctaatgaattagcctgggtattaatctatag 423
Query: 61 atgagaggagaaagaatatctatacaatggactttgcttctatcttcccattactctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgagaggagaaagaatatctatacaatggactttgcttctatcttcccattactctttt 363
Query: 121 taggttttaaaactgttttaaactgattgatttaaatttatttgtttattaattcatctt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 362 taggttttaaaactgttttaaactgattgatttaaatttatttgtttattaattca---t 306
Query: 181 atttctttgataatttcatacatctatatactaaaccttgaccatttaacacacccttct 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atttccttgataatttcatacatctatatactaaaccttgaccatttaacacacccttct 246
Query: 241 ccattacccactcctgctcctactaacagagtccctcccatttta 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ccattacccactcctgctcctactaacagagtccctcccatttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 687
Length adjustment: 9
Effective length of query: 281
Effective length of database: 678
Effective search space: 190518
Effective search space used: 190518
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
