Query= MSMg01no159_f03.b1 MSMg01no159_f03.b1 CHROMAT_FILE:
MSMg01no159_f03.b1 PHD_FILE: MSMg01no159_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:01 2005
(317 letters)
>mm_chr7_82752882_82753594
Length = 713
Score = 555 bits (287), Expect = e-162
Identities = 304/311 (97%), Gaps = 4/311 (1%)
Strand = Plus / Plus
Query: 5 gaattcctaattctaaaagcgtagatatgttgggttgaacatattttgggaatgtagtta 64
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattcctaattctaaaagcgtagatatgttggattgaacatattttgggaatgtagtta 264
Query: 65 cgtggctgattattttgcttgaaaggggttctaaaactggttatactgtgtctttacatc 124
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 cgtggctgaatattttgcttgaaaggggttctaaaactgattatactgtgtctttacatc 324
Query: 125 ggtatttgaggcagatggatagaaggcccggaaagacagtgcttgtccaacaagacttgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtatttgaggcagatggatagaaggcccggaaagacagtgcttgtccaacaagacttgg 384
Query: 185 cttacaggtatcagtgacatctttttctcttagtcagcacacccccacacacacacacac 244
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 385 cttacaggtatcagtgacatctttttctcttagtcagcacaccccc-c---cacacacac 440
Query: 245 ttttcttttcatgatcaatttttaaaaggtatctttggtttcctcctagaaaacaaactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttcttttcatgatcaatttttaaaaggtatctttggtttcctcctagaaaacaaactt 500
Query: 305 gaagcagatgg 315
|||||||||||
Sbjct: 501 gaagcagatgg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 713
Length adjustment: 9
Effective length of query: 308
Effective length of database: 704
Effective search space: 216832
Effective search space used: 216832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_f03.g1 MSMg01no159_f03.g1 CHROMAT_FILE:
MSMg01no159_f03.g1 PHD_FILE: MSMg01no159_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:01 2005
(283 letters)
>mm_chr7_82904180_82904862
Length = 683
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%)
Strand = Plus / Minus
Query: 1 tattgacaaaggcccagcagcatagcccgtctttgcatgcctttctgttcattttatgtc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 483 tattgacaaaggcccagcagcatagcccgtctttgtatgcctttctgttcattttatgtc 424
Query: 61 ggttcaatcacccaccatcacccactcatccaaccttatacctttcataagtgtggcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggttcaatcacccaccatcacccactcatccaaccttatacctttcataagtgtggcatt 364
Query: 121 ctgaattccatagaatctgcctggagctttctgtttggttttccttcgttgtggtatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 363 ctgaattccatagaatctgcctggagctttctgtttggttttccttcgtcgtggtatgta 304
Query: 181 gtctggtactgtgcagttctgtgggctcctgtggtcattcaggtagacagtggagatctg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtctggtactgtgcagctctgtgggctcctgtggtcattcaggtagacagtggagatctg 244
Query: 241 tagtgcctttgtcttcttgggtgggggtttctgggaagtgtgg 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tagtgcctttgtcttcttgggtgggggtttctgggaagtgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
