Query= MSMg01no159_n11.b1 MSMg01no159_n11.b1 CHROMAT_FILE:
MSMg01no159_n11.b1 PHD_FILE: MSMg01no159_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:38 2005
(688 letters)
>mm_chr7_82395151_82396236
Length = 1086
Score = 884 bits (457), Expect = 0.0
Identities = 499/513 (97%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacttattcacttgcttattacctgaacttttctactagaaacaagatggcttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacttattcacttgcttattacctgaacttttctactagaaacaagatggcttt 263
Query: 64 tcaaagcctggctcttgctcatcccagtaacagttaggtgatgataataataaatagcaa 123
|||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 tcaaaggctggctctcgctcatcccagtaacagataggtgatgataataataaatagcaa 323
Query: 124 tgcttatgtcatcttgtgataatccagacaatcatattatatgttacatacattaattca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcttatgtcatcttgtgataatccagacaatcatattatatgttacatacattaattca 383
Query: 184 cctaatgcattggggaggaaatttttctgtccctcgacatcatagcccagagaacttaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctaatgcattggggaggaaatttttctgtccctcgacatcatagcccagagaacttaag 443
Query: 244 ttgcctacaagattcacacgtcttgtaaagagtagaacttgggacctagatgagctgtct 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 ttgcctacaagattcacacgtcttgtaaagagtagaacttggggcctagatgagctgtct 503
Query: 304 ccaaagagaaaatgtcttactctccttctcctgcttttacttgttgaggagaaactggag 363
|||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 504 ccaaagagaaaa-gtcttactctcgttttc-tgcttttacttgttgaggagaaactggag 561
Query: 364 cctttgtgccaggaagcagtggggaggaacctttgcactgaggagcgagcgagggctctt 423
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cctttgtgggaggaagcagtacggaggaacctttgcactgaggagcgagcgagggctctt 621
Query: 424 gggatcttatgtccatcagcctgcctctctctaggctcttcttcaggttcatctctactt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gggatcttatgtccatcagcctgcctctctctaggctcttcttcaggttcatctctactt 681
Query: 484 tctaccaattagagcagcctgtgcgcacatttc 516
|||||||||||||| |||||||||||| |||||
Sbjct: 682 tctaccaattagagaagcctgtgcgcatatttc 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1086
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1076
Effective search space: 729528
Effective search space used: 729528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_n11.g1 MSMg01no159_n11.g1 CHROMAT_FILE:
MSMg01no159_n11.g1 PHD_FILE: MSMg01no159_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:38 2005
(283 letters)
>mm_chr7_82486563_82487243
Length = 681
Score = 433 bits (224), Expect = e-126
Identities = 269/290 (92%), Gaps = 13/290 (4%)
Strand = Plus / Minus
Query: 1 atcgtctgagttaacacaagcgtc-------acactcacctggggcagaaggaattaacg 53
|||||||||||||||||||| ||| ||| || || ||||||||||||||||
Sbjct: 521 atcgtctgagttaacacaagtgtctgagttaaca--ca--aggagcagaaggaattaacg 466
Query: 54 acagaatcacagcactgtaatgccctctgatgctacctacaacgcttgccagcagtacag 113
||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 465 acagaatcacagcacagtaatgccctctgatgctacctacaacacttgtcagcagtacag 406
Query: 114 tgtgaacaagcagttgctggtgctgacgttcctgggagatacttgactgtacatttgggt 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgtgaacaagcagttgctggtgctgacgttcctgggagatacttgactgtacatttgggt 346
Query: 174 aaaaccgttgtgtggctgtgttattttcctggttgcttaaaagaaagtagccttcacttt 233
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 345 aaaaccgttgtgt--ctgtgttactttcctggttgcttaaaagaaagtagccttcacttt 288
Query: 234 ttttttttaattcacttgacacatggtgttctgaagaccagacatacaaa 283
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tttttttttattcacttgacacatggtgttctgaagaccagacatacaaa 238
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 681
Length adjustment: 9
Effective length of query: 274
Effective length of database: 672
Effective search space: 184128
Effective search space used: 184128
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
