Query= MSMg01no161_a03.b1 MSMg01no161_a03.b1 CHROMAT_FILE:
MSMg01no161_a03.b1 PHD_FILE: MSMg01no161_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:08 2005
(416 letters)
>mm_chr7_142951365_142952180
Length = 816
Score = 702 bits (363), Expect = 0.0
Identities = 390/399 (97%)
Strand = Plus / Minus
Query: 16 gaattcaggtcaccggctgggccatcctcgtccgcagcaggagtggaccgcgaacactca 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gaattcaggtcaccggctgggccatcctcgtccgcagcaggagtggaccgcgaacactca 555
Query: 76 gtgttgcacccagtacaaggtgtgtctggtggccaactttgctctaaagctttgctctcg 135
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 554 gtgttgcacccagtacaaggtgtgtttggtggccaactttgctctaaagctttgctctcg 495
Query: 136 aagttttggggctttcataccatgactccaaaattgagtttctaaggaaagtagagcatc 195
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aagttttggggctttcataggatgactccaaaattgagtttctaaggaaagtagagcatc 435
Query: 196 tagctcgacacccccaagcagggcagggggccagtacagatgtgtgacagctgctcactt 255
||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 434 tagctcgacgcctccaagcagggcagggggccagtacagatgtgtgactgctgctcactt 375
Query: 256 aacttcatccaggtacccaactcattctcaccacaggttgtccttctttagctctatgtc 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 374 aacttcatccaggtacccaactcattctcaccacaggttgtccttctttagctctgtgtc 315
Query: 316 gccgttcctcacaaccctttttctttctctattttactaaaagttccaaataccttgcat 375
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gccgttcctcacaaccctttttctttctctattttactaaaagttccaaataccttgcac 255
Query: 376 atgtgggaaaaaaaagacttgcttcctctccctgctctg 414
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 254 atgtgggaaaaaaaagacttgcttcctctccccgctctg 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_a03.g1 MSMg01no161_a03.g1 CHROMAT_FILE:
MSMg01no161_a03.g1 PHD_FILE: MSMg01no161_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:08 2005
(380 letters)
>mm_chr7_142783831_142784609
Length = 779
Score = 681 bits (352), Expect = 0.0
Identities = 373/380 (98%), Gaps = 1/380 (0%)
Strand = Plus / Plus
Query: 1 acccccacaatcctgtcttgttgggttatcagggtaaagctgcctccgtgacctcaggta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 acccccacaatcctgtcttgttgggttgtcagggtaaagctgcctccgtgacctcaggta 260
Query: 61 cagagactgtggagcagtcaggccctctgctctgggccccagccttccctgtgtctgtgg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagactgtggagcagtcaggcc-tctgctctgggccccagccttccctgtgtctgtgg 319
Query: 121 gcaagacaggttcttgatgctccatccttgttccctcggactatggaccatagaaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcaagacaggttcttgatgctccatccttgttccctcggactatggaccatagaaggact 379
Query: 181 cccagactcgtgggaggcaaacgaaaggcaggcacacagcagcccggctctgcccgacct 240
|| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 380 cctagactcgtgggaggcaaacgaaagccaggcacacagcagcccagctctgcccgacct 439
Query: 241 ctgacgtctttgctttctgccaaggcctagaaccaccagctgtttatccagcagctcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgacgtctttgctttctgccaaggcctagaaccaccagctgtttatccagcagctcatg 499
Query: 301 cacaggtgagatgattttctggcttaaaggagactagtttctttgaaattatggctgtac 360
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 cacacgtgagatgattttctggcttaaaggagacgagtttctttgaaattatggctgtac 559
Query: 361 cgcctgcccagggaagaggg 380
||||||||||||||||||||
Sbjct: 560 cgcctgcccagggaagaggg 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 779
Length adjustment: 9
Effective length of query: 371
Effective length of database: 770
Effective search space: 285670
Effective search space used: 285670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
