Query= MSMg01no161_k23.b1 MSMg01no161_k23.b1 CHROMAT_FILE:
MSMg01no161_k23.b1 PHD_FILE: MSMg01no161_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:34 2005
(366 letters)
>mm_chr7_79288121_79288884
Length = 764
Score = 642 bits (332), Expect = 0.0
Identities = 347/352 (98%), Gaps = 3/352 (0%)
Strand = Plus / Plus
Query: 16 gaatt-agatctggactctcccttggttaaatgactctgaggggaaatgttttgatgtct 74
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattcagatctggactctcccttggttaaatgactctgaggggaaatgttttgatgtct 274
Query: 75 ttcctgatgcaacaccagtgtactgctggtgactcagagttaatcacctattcacatcat 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttcctgatgcaacaccagtgtactgctggtgactcagagttaatcacctattcacatcat 334
Query: 135 ccatgccctttccacatgctggcttacaggaacatgccaccacacctggctcattgctca 194
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 335 ccatgccctttccacatgctggcttacaggaacatgccaccacacccggctcattgctca 394
Query: 195 tagtcttcccatgttccttctctgaaaataacatcacttggatgtttgcatgtcatttac 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tagtcttcccatgttccttctctgaaaataacatcacttggatgtttgcatgtcatttac 454
Query: 255 ggtccttatgtactttacattttttgattttttttttccatgtcacccaagcccgaaaac 314
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 455 ggtccttatgtactttacattttttga-tttttttt-ccatgtcacccaagcccgaaaac 512
Query: 315 aatctccacactgtgcataaaggacaggcaacgtgcttgtaaagtacaaagc 366
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 513 aatctccacactgtgcataaaggacgggcaacgtgcttgtaaagtacaaagc 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 764
Length adjustment: 9
Effective length of query: 357
Effective length of database: 755
Effective search space: 269535
Effective search space used: 269535
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_k23.g1 MSMg01no161_k23.g1 CHROMAT_FILE:
MSMg01no161_k23.g1 PHD_FILE: MSMg01no161_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:34 2005
(282 letters)
>mm_chr7_79444772_79445453
Length = 682
Score = 503 bits (260), Expect = e-147
Identities = 274/282 (97%), Gaps = 6/282 (2%)
Strand = Plus / Minus
Query: 1 tggggagtaaactctcttaaaggaaaagtagagcagagctggctgaagcaggggtgtgaa 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tggggagaaaactctcttaaaggaaaagtagagcagagctggctgaagcaggggtgtgaa 487
Query: 61 caggcccaccgtggaaggctaaatttccgaatctgattccgtaaatatgtcatatcattt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cag------tgtggaaggctaaatttccgaatctgattccgtaaatatgtcatatcattt 433
Query: 121 tcatatgtaaatccttcatttttctcaagtaaatcatctatttcataaaatcacatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tcatatgtaaatccttcatttttctcaagtaaatcatctatttcataaaatcacatatat 373
Query: 181 attttaatgcaacacagattgaacagtggcgattttttgtggctgctaacaccttttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 attttaatgcaacacagattgaacagtggcgattttttgtggctgctaacaccttttagc 313
Query: 241 tcaatgttttaaatgcagactctataggttgtcttaggtgaa 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcaatgttttaaatgcagactctataggttgtcttaggtgaa 271
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
