Query= MSMg01no168_l09.b1 MSMg01no168_l09.b1 CHROMAT_FILE:
MSMg01no168_l09.b1 PHD_FILE: MSMg01no168_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:08 2005
(274 letters)
>mm_chr7_120330527_120331200
Length = 674
Score = 476 bits (246), Expect = e-139
Identities = 264/270 (97%)
Strand = Plus / Plus
Query: 5 gaattcacttggttctcacgtatctctccaatctgttctccagaaagcactgacaagatc 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttggttctcacgtgtctctccaatctgttctccagaaagcactgacaagatc 264
Query: 65 tctgggttctctatactttctataagagcggaataaacggacagatggagctcactgagt 124
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 265 tctgggttctctatactttctataagagcagaataaacggacaggtggagctcactgagt 324
Query: 125 ctttctgaaggtcagactcctcccatgccctttgggccccttaccacctaccctgcctgg 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 ctttctgaaggtcagactcctcccatgctctttgggccccttaccacctaccctgcctgg 384
Query: 185 ttctctactggaacctccactttctccactttcccaccaactgagtaagccctgctcacc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 ttctctactggaacctccactttctccactttcccaccaactgagtaagccctgctcatc 444
Query: 245 tgcataactttgcatggcctacacacacac 274
|||||| |||||||||||||||||||||||
Sbjct: 445 tgcatagctttgcatggcctacacacacac 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_l09.g1 MSMg01no168_l09.g1 CHROMAT_FILE:
MSMg01no168_l09.g1 PHD_FILE: MSMg01no168_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:08 2005
(243 letters)
>mm_chr7_120492658_120493301
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 tataatttttaaaacaaaac-aaaaaaaacttgccttcatttcaggagaatattcaaaat 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tataatttttaaaacaaaacaaaaaaaaacttgccttcatttcaggagaatattcaaaat 385
Query: 60 atgttaggatattgggggcattattacagaacacttaaatatccatataaagactaatta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgttaggatattgggggcattattacagaacacttaaatatccatataaagactaatta 325
Query: 120 gaaaattgtagaacacataaatcatgaccttgacttgtaaatgaagttcagaggaaaggt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaaattgtagaacacataaatcatgaccttgacttgtaaatgaagttcagaggaaaggt 265
Query: 180 cattgtcagcctgtgttagggggaaataaggtgtctagtcctgaggcgcttaaagcatta 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cattgtcagcctgtgttagtgggaaataaggtgtctagtcctgaggcgcttaaagcatta 205
Query: 240 gagt 243
||||
Sbjct: 204 gagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
