Query= MSMg01no169_h22.b1 MSMg01no169_h22.b1 CHROMAT_FILE:
MSMg01no169_h22.b1 PHD_FILE: MSMg01no169_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:12 2005
(313 letters)
>mm_chr7_35197318_35198030
Length = 713
Score = 491 bits (254), Expect = e-143
Identities = 291/310 (93%), Gaps = 11/310 (3%)
Strand = Plus / Plus
Query: 4 ggaattcttgccattacacatcactcccacctcagtggtcttctttctgtggtcctcacc 63
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgccattacacatcactaccacctcagtggtcttctttctgtggtcctcacc 263
Query: 64 ctcatgaatgaagccctaaaagacgatgtgtgtgggcctgtctgaggtcgagcagagtag 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcatgaatgaagccataaaagacgatgtgtgtgggcctgtctgaggtcgagcagagtag 323
Query: 124 caatgtacctacaaacctggtacccgggaggcataagtgtaggattgtcaagtcaaggac 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 324 caatgtacctacaaacctggtacccgggaggcataagtgtaggattgtcaagtcaaggcc 383
Query: 184 agcctgaggtaccaggtgaggcccggcttcnaaaaaaaaaaaaaaaaaaaaaacccacgg 243
|||||||||||||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 384 agcctgaggtaccaggtgaggcccagcttc-----------aaaaaaaaataacccacgg 432
Query: 244 atcaagattgtgtgatgatttgtctatacttgttctagggcgtggcgctattaggaggtg 303
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 433 atcaagattgtgtgatgatttgtctatacttggcctagggcgtggcgccattaggaggtg 492
Query: 304 tggtcttgtt 313
||||||||||
Sbjct: 493 tggtcttgtt 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_h22.g1 MSMg01no169_h22.g1 CHROMAT_FILE:
MSMg01no169_h22.g1 PHD_FILE: MSMg01no169_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:12 2005
(289 letters)
>mm_chr7_35387059_35387752
Length = 694
Score = 532 bits (275), Expect = e-155
Identities = 285/291 (97%), Gaps = 5/291 (1%)
Strand = Plus / Minus
Query: 1 tctttgaagtgtttataattggccacttggaataaccacagtgcttttatagagtcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctttgaagtgtttataattggccacttggaataaccacagtgcttttatagagtcatca 432
Query: 61 cgcacagggtcctgtctcagggcaggatcgcagctgacgaacatggttcgtcctctgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgcacagggtcctgtctcagggcaggatcgcagctgacgaacatggttcgtcctctgaaa 372
Query: 121 agaatttcaaagtaaggcaggttcaaccctgatcatcgtggaccatgcgggagagacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agaatttcaaagtaaggcaggttcaaccctgatcatcgtggaccatgcgggagagacaga 312
Query: 181 tgaaaacactgctccttaactttccccgggctaacctggcccttgtctggatactgcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgaaaacactgctccttaactttccccgggctaacctggcccttgtctggatactgcagt 252
Query: 241 gacctggtctctcccgtgattgac-----tcttccccaggcctcgccctca 286
||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 251 gacctggtctcccccgtgattgacagtactcttccccaggcctcgccctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 694
Length adjustment: 9
Effective length of query: 280
Effective length of database: 685
Effective search space: 191800
Effective search space used: 191800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
